Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12790 and BWI76_RS12795 are separated by 149 nucleotides BWI76_RS12795 and BWI76_RS12800 are separated by 195 nucleotides BWI76_RS12800 and BWI76_RS12805 overlap by 1 nucleotides BWI76_RS12805 and BWI76_RS12810 are separated by 7 nucleotides BWI76_RS12810 and BWI76_RS12815 are separated by 0 nucleotides
BWI76_RS12790: BWI76_RS12790 - lactate dehydrogenase, at 2,665,125 to 2,666,114
_RS12790
BWI76_RS12795: BWI76_RS12795 - DedA family protein, at 2,666,264 to 2,666,761
_RS12795
BWI76_RS12800: BWI76_RS12800 - hypothetical protein, at 2,666,957 to 2,669,596
_RS12800
BWI76_RS12805: BWI76_RS12805 - YnbE family lipoprotein, at 2,669,596 to 2,669,781
_RS12805
BWI76_RS12810: BWI76_RS12810 - hypothetical protein, at 2,669,789 to 2,670,112
_RS12810
BWI76_RS12815: BWI76_RS12815 - transcriptional regulator FeaR, at 2,670,113 to 2,671,021
_RS12815
Position (kb)
2666
2667
2668
2669
2670 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2666.276 kb on + strand at 2666.481 kb on - strand, within BWI76_RS12795 at 2666.612 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.640 kb on - strand, within BWI76_RS12795 at 2666.794 kb on - strand at 2666.968 kb on + strand at 2667.125 kb on - strand at 2667.276 kb on - strand, within BWI76_RS12800 at 2667.594 kb on - strand, within BWI76_RS12800 at 2667.719 kb on + strand, within BWI76_RS12800 at 2668.310 kb on - strand, within BWI76_RS12800 at 2668.654 kb on - strand, within BWI76_RS12800 at 2668.975 kb on + strand, within BWI76_RS12800 at 2669.010 kb on + strand, within BWI76_RS12800 at 2669.147 kb on - strand, within BWI76_RS12800 at 2669.173 kb on + strand, within BWI76_RS12800 at 2669.337 kb on + strand at 2669.345 kb on - strand at 2670.529 kb on + strand, within BWI76_RS12815
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 2,666,276 + -3.0 2,666,481 - BWI76_RS12795 0.44 +0.7 2,666,612 - BWI76_RS12795 0.70 +0.2 2,666,640 - BWI76_RS12795 0.76 +0.4 2,666,640 - BWI76_RS12795 0.76 -1.6 2,666,640 - BWI76_RS12795 0.76 -0.3 2,666,640 - BWI76_RS12795 0.76 +0.3 2,666,640 - BWI76_RS12795 0.76 -1.1 2,666,794 - +0.8 2,666,968 + +0.9 2,667,125 - -1.9 2,667,276 - BWI76_RS12800 0.12 -1.4 2,667,594 - BWI76_RS12800 0.24 -1.2 2,667,719 + BWI76_RS12800 0.29 -0.6 2,668,310 - BWI76_RS12800 0.51 -1.1 2,668,654 - BWI76_RS12800 0.64 -1.1 2,668,975 + BWI76_RS12800 0.76 -1.4 2,669,010 + BWI76_RS12800 0.78 -0.5 2,669,147 - BWI76_RS12800 0.83 -1.0 2,669,173 + BWI76_RS12800 0.84 -0.8 2,669,337 + -0.5 2,669,345 - -0.6 2,670,529 + BWI76_RS12815 0.46 -0.8
Or see this region's nucleotide sequence