Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11980 and BWI76_RS11985 are separated by 72 nucleotides BWI76_RS11985 and BWI76_RS11990 are separated by 177 nucleotides BWI76_RS11990 and BWI76_RS11995 are separated by 81 nucleotides
BWI76_RS11980: BWI76_RS11980 - DeoR family transcriptional regulator, at 2,521,043 to 2,521,792
_RS11980
BWI76_RS11985: BWI76_RS11985 - hypothetical protein, at 2,521,865 to 2,522,047
_RS11985
BWI76_RS11990: BWI76_RS11990 - exoribonuclease II, at 2,522,225 to 2,524,159
_RS11990
BWI76_RS11995: BWI76_RS11995 - hypothetical protein, at 2,524,241 to 2,525,398
_RS11995
Position (kb)
2522
2523
2524
2525 Strain fitness (log2 ratio)
-2
-1
0
1 at 2521.356 kb on + strand, within BWI76_RS11980 at 2521.622 kb on - strand, within BWI76_RS11980 at 2521.805 kb on + strand at 2521.881 kb on + strand at 2521.881 kb on + strand at 2521.881 kb on + strand at 2521.881 kb on + strand at 2521.889 kb on - strand, within BWI76_RS11985 at 2521.889 kb on - strand, within BWI76_RS11985 at 2521.889 kb on - strand, within BWI76_RS11985 at 2521.978 kb on - strand, within BWI76_RS11985 at 2522.049 kb on + strand at 2522.057 kb on - strand at 2522.057 kb on - strand at 2522.198 kb on + strand at 2522.198 kb on + strand at 2522.206 kb on - strand at 2522.588 kb on - strand, within BWI76_RS11990 at 2522.892 kb on - strand, within BWI76_RS11990 at 2523.353 kb on - strand, within BWI76_RS11990 at 2523.396 kb on + strand, within BWI76_RS11990 at 2523.595 kb on + strand, within BWI76_RS11990 at 2523.705 kb on + strand, within BWI76_RS11990 at 2524.064 kb on + strand at 2524.102 kb on + strand at 2524.374 kb on + strand, within BWI76_RS11995 at 2524.382 kb on - strand, within BWI76_RS11995 at 2524.382 kb on - strand, within BWI76_RS11995 at 2524.398 kb on + strand, within BWI76_RS11995 at 2524.449 kb on + strand, within BWI76_RS11995 at 2524.586 kb on + strand, within BWI76_RS11995 at 2524.753 kb on + strand at 2524.847 kb on - strand, within BWI76_RS11995 at 2524.861 kb on + strand, within BWI76_RS11995 at 2524.986 kb on - strand, within BWI76_RS11995 at 2525.011 kb on + strand, within BWI76_RS11995 at 2525.050 kb on + strand, within BWI76_RS11995
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 2,521,356 + BWI76_RS11980 0.42 -1.0 2,521,622 - BWI76_RS11980 0.77 -0.5 2,521,805 + -0.4 2,521,881 + +0.4 2,521,881 + -0.3 2,521,881 + -0.9 2,521,881 + +0.5 2,521,889 - BWI76_RS11985 0.13 -0.8 2,521,889 - BWI76_RS11985 0.13 +0.8 2,521,889 - BWI76_RS11985 0.13 -0.8 2,521,978 - BWI76_RS11985 0.62 +0.4 2,522,049 + +1.0 2,522,057 - +0.4 2,522,057 - +0.4 2,522,198 + +0.3 2,522,198 + -1.4 2,522,206 - -1.3 2,522,588 - BWI76_RS11990 0.19 -0.2 2,522,892 - BWI76_RS11990 0.34 -0.4 2,523,353 - BWI76_RS11990 0.58 -1.1 2,523,396 + BWI76_RS11990 0.61 -2.1 2,523,595 + BWI76_RS11990 0.71 -1.4 2,523,705 + BWI76_RS11990 0.76 -1.4 2,524,064 + -1.0 2,524,102 + -0.1 2,524,374 + BWI76_RS11995 0.11 +0.5 2,524,382 - BWI76_RS11995 0.12 -2.1 2,524,382 - BWI76_RS11995 0.12 -0.3 2,524,398 + BWI76_RS11995 0.14 -0.7 2,524,449 + BWI76_RS11995 0.18 -0.9 2,524,586 + BWI76_RS11995 0.30 -0.1 2,524,753 + +1.0 2,524,847 - BWI76_RS11995 0.52 +0.0 2,524,861 + BWI76_RS11995 0.54 +0.3 2,524,986 - BWI76_RS11995 0.64 +0.2 2,525,011 + BWI76_RS11995 0.66 +0.3 2,525,050 + BWI76_RS11995 0.70 +0.0
Or see this region's nucleotide sequence