Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11645 and BWI76_RS11650 are separated by 9 nucleotides BWI76_RS11650 and BWI76_RS11655 overlap by 4 nucleotides BWI76_RS11655 and BWI76_RS11660 overlap by 11 nucleotides BWI76_RS11660 and BWI76_RS11665 are separated by 191 nucleotides
BWI76_RS11645: BWI76_RS11645 - ABC transporter substrate-binding protein, at 2,450,359 to 2,451,519
_RS11645
BWI76_RS11650: BWI76_RS11650 - carboxymuconolactone decarboxylase family protein, at 2,451,529 to 2,452,080
_RS11650
BWI76_RS11655: BWI76_RS11655 - TVP38/TMEM64 family protein, at 2,452,077 to 2,452,775
_RS11655
BWI76_RS11660: BWI76_RS11660 - TVP38/TMEM64 family protein, at 2,452,765 to 2,453,418
_RS11660
BWI76_RS11665: BWI76_RS11665 - exodeoxyribonuclease III, at 2,453,610 to 2,454,416
_RS11665
Position (kb)
2452
2453 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2452.180 kb on - strand, within BWI76_RS11655 at 2452.253 kb on + strand, within BWI76_RS11655 at 2452.253 kb on + strand, within BWI76_RS11655 at 2452.303 kb on + strand, within BWI76_RS11655 at 2452.454 kb on + strand, within BWI76_RS11655 at 2452.477 kb on + strand, within BWI76_RS11655 at 2452.676 kb on + strand, within BWI76_RS11655 at 2452.684 kb on - strand, within BWI76_RS11655 at 2452.685 kb on + strand, within BWI76_RS11655 at 2452.832 kb on + strand, within BWI76_RS11660 at 2452.840 kb on - strand, within BWI76_RS11660 at 2452.847 kb on + strand, within BWI76_RS11660 at 2452.847 kb on + strand, within BWI76_RS11660 at 2452.852 kb on + strand, within BWI76_RS11660 at 2452.885 kb on - strand, within BWI76_RS11660 at 2452.953 kb on - strand, within BWI76_RS11660 at 2452.953 kb on - strand, within BWI76_RS11660 at 2453.031 kb on - strand, within BWI76_RS11660 at 2453.045 kb on + strand, within BWI76_RS11660 at 2453.137 kb on - strand, within BWI76_RS11660 at 2453.139 kb on + strand, within BWI76_RS11660 at 2453.147 kb on - strand, within BWI76_RS11660 at 2453.151 kb on + strand, within BWI76_RS11660 at 2453.288 kb on + strand, within BWI76_RS11660 at 2453.298 kb on + strand, within BWI76_RS11660 at 2453.332 kb on + strand, within BWI76_RS11660 at 2453.332 kb on - strand, within BWI76_RS11660 at 2453.350 kb on - strand, within BWI76_RS11660 at 2453.350 kb on - strand, within BWI76_RS11660 at 2453.475 kb on + strand at 2453.488 kb on - strand at 2453.515 kb on + strand at 2453.525 kb on - strand at 2453.535 kb on + strand at 2453.576 kb on - strand at 2453.576 kb on - strand at 2453.607 kb on + strand at 2453.623 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 2,452,180 - BWI76_RS11655 0.15 +0.0 2,452,253 + BWI76_RS11655 0.25 -0.4 2,452,253 + BWI76_RS11655 0.25 -0.7 2,452,303 + BWI76_RS11655 0.32 -1.0 2,452,454 + BWI76_RS11655 0.54 +0.1 2,452,477 + BWI76_RS11655 0.57 +0.2 2,452,676 + BWI76_RS11655 0.86 +0.6 2,452,684 - BWI76_RS11655 0.87 +2.3 2,452,685 + BWI76_RS11655 0.87 +1.2 2,452,832 + BWI76_RS11660 0.10 +2.2 2,452,840 - BWI76_RS11660 0.11 +0.1 2,452,847 + BWI76_RS11660 0.13 +0.9 2,452,847 + BWI76_RS11660 0.13 -1.0 2,452,852 + BWI76_RS11660 0.13 -0.9 2,452,885 - BWI76_RS11660 0.18 +0.8 2,452,953 - BWI76_RS11660 0.29 +0.4 2,452,953 - BWI76_RS11660 0.29 +0.4 2,453,031 - BWI76_RS11660 0.41 +0.1 2,453,045 + BWI76_RS11660 0.43 -0.0 2,453,137 - BWI76_RS11660 0.57 +0.6 2,453,139 + BWI76_RS11660 0.57 +0.4 2,453,147 - BWI76_RS11660 0.58 +1.2 2,453,151 + BWI76_RS11660 0.59 +0.4 2,453,288 + BWI76_RS11660 0.80 +0.3 2,453,298 + BWI76_RS11660 0.81 +1.1 2,453,332 + BWI76_RS11660 0.87 -0.3 2,453,332 - BWI76_RS11660 0.87 +0.5 2,453,350 - BWI76_RS11660 0.89 -1.8 2,453,350 - BWI76_RS11660 0.89 +0.2 2,453,475 + +0.8 2,453,488 - +1.3 2,453,515 + +0.7 2,453,525 - +0.0 2,453,535 + -0.8 2,453,576 - -0.9 2,453,576 - -0.7 2,453,607 + -0.2 2,453,623 - +2.2
Or see this region's nucleotide sequence