Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08060

Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08045 and BWI76_RS08050 are separated by 17 nucleotidesBWI76_RS08050 and BWI76_RS08055 overlap by 68 nucleotidesBWI76_RS08055 and BWI76_RS08060 are separated by 46 nucleotidesBWI76_RS08060 and BWI76_RS08065 overlap by 8 nucleotides BWI76_RS08045: BWI76_RS08045 - ribosome silencing factor RsfS, at 1,705,537 to 1,705,854 _RS08045 BWI76_RS08050: BWI76_RS08050 - hypothetical protein, at 1,705,872 to 1,706,143 _RS08050 BWI76_RS08055: BWI76_RS08055 - alpha-ribazole phosphatase, at 1,706,076 to 1,706,705 _RS08055 BWI76_RS08060: BWI76_RS08060 - nicotinic acid mononucleotide adenylyltransferase, at 1,706,752 to 1,707,402 _RS08060 BWI76_RS08065: BWI76_RS08065 - DNA polymerase III subunit delta, at 1,707,395 to 1,708,426 _RS08065 Position (kb) 1706 1707 1708Strain fitness (log2 ratio) -3 -2 -1 0 1at 1706.276 kb on - strand, within BWI76_RS08055at 1706.727 kb on + strandat 1706.735 kb on - strandat 1706.735 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
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1,706,276 - BWI76_RS08055 0.32 -3.2
1,706,727 + +0.2
1,706,735 - -1.1
1,706,735 - +0.5

Or see this region's nucleotide sequence