Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07470 and BWI76_RS07475 are separated by 32 nucleotides BWI76_RS07475 and BWI76_RS07480 are separated by 36 nucleotides BWI76_RS07480 and BWI76_RS07485 are separated by 153 nucleotides
BWI76_RS07470: BWI76_RS07470 - MBL fold metallo-hydrolase, at 1,575,702 to 1,576,802
_RS07470
BWI76_RS07475: BWI76_RS07475 - DNA-binding transcriptional regulator RamA, at 1,576,835 to 1,577,176
_RS07475
BWI76_RS07480: BWI76_RS07480 - TonB-dependent siderophore receptor, at 1,577,213 to 1,579,357
_RS07480
BWI76_RS07485: BWI76_RS07485 - esterase, at 1,579,511 to 1,581,133
_RS07485
Position (kb)
1577
1578
1579
1580 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1576.364 kb on + strand, within BWI76_RS07470 at 1576.519 kb on - strand, within BWI76_RS07470 at 1576.693 kb on + strand at 1576.703 kb on + strand at 1576.801 kb on + strand at 1576.969 kb on + strand, within BWI76_RS07475 at 1577.368 kb on + strand at 1577.598 kb on + strand, within BWI76_RS07480 at 1577.656 kb on - strand, within BWI76_RS07480 at 1577.711 kb on + strand, within BWI76_RS07480 at 1577.711 kb on + strand, within BWI76_RS07480 at 1577.711 kb on + strand, within BWI76_RS07480 at 1577.724 kb on + strand, within BWI76_RS07480 at 1577.724 kb on + strand, within BWI76_RS07480 at 1577.734 kb on + strand, within BWI76_RS07480 at 1577.749 kb on + strand, within BWI76_RS07480 at 1578.311 kb on - strand, within BWI76_RS07480 at 1578.345 kb on - strand, within BWI76_RS07480 at 1578.516 kb on - strand, within BWI76_RS07480 at 1578.624 kb on - strand, within BWI76_RS07480 at 1578.655 kb on - strand, within BWI76_RS07480 at 1578.678 kb on + strand, within BWI76_RS07480 at 1578.983 kb on - strand, within BWI76_RS07480 at 1579.678 kb on + strand, within BWI76_RS07485 at 1579.876 kb on + strand, within BWI76_RS07485 at 1579.926 kb on + strand, within BWI76_RS07485 at 1580.167 kb on + strand, within BWI76_RS07485 at 1580.175 kb on - strand, within BWI76_RS07485 at 1580.238 kb on + strand, within BWI76_RS07485 at 1580.266 kb on - strand, within BWI76_RS07485 at 1580.279 kb on + strand, within BWI76_RS07485 at 1580.314 kb on + strand, within BWI76_RS07485
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 1,576,364 + BWI76_RS07470 0.60 -0.3 1,576,519 - BWI76_RS07470 0.74 +0.1 1,576,693 + -0.1 1,576,703 + -1.3 1,576,801 + -1.9 1,576,969 + BWI76_RS07475 0.39 +0.2 1,577,368 + -2.3 1,577,598 + BWI76_RS07480 0.18 +0.2 1,577,656 - BWI76_RS07480 0.21 +0.1 1,577,711 + BWI76_RS07480 0.23 -0.2 1,577,711 + BWI76_RS07480 0.23 -0.7 1,577,711 + BWI76_RS07480 0.23 +0.8 1,577,724 + BWI76_RS07480 0.24 -0.2 1,577,724 + BWI76_RS07480 0.24 +0.3 1,577,734 + BWI76_RS07480 0.24 +0.5 1,577,749 + BWI76_RS07480 0.25 +0.4 1,578,311 - BWI76_RS07480 0.51 +1.2 1,578,345 - BWI76_RS07480 0.53 +0.7 1,578,516 - BWI76_RS07480 0.61 -0.0 1,578,624 - BWI76_RS07480 0.66 -2.6 1,578,655 - BWI76_RS07480 0.67 +0.5 1,578,678 + BWI76_RS07480 0.68 +1.8 1,578,983 - BWI76_RS07480 0.83 -0.2 1,579,678 + BWI76_RS07485 0.10 -2.6 1,579,876 + BWI76_RS07485 0.22 -0.5 1,579,926 + BWI76_RS07485 0.26 +0.8 1,580,167 + BWI76_RS07485 0.40 +0.7 1,580,175 - BWI76_RS07485 0.41 -0.9 1,580,238 + BWI76_RS07485 0.45 -1.5 1,580,266 - BWI76_RS07485 0.47 +0.3 1,580,279 + BWI76_RS07485 0.47 -0.8 1,580,314 + BWI76_RS07485 0.49 +0.4
Or see this region's nucleotide sequence