Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07480

Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07470 and BWI76_RS07475 are separated by 32 nucleotidesBWI76_RS07475 and BWI76_RS07480 are separated by 36 nucleotidesBWI76_RS07480 and BWI76_RS07485 are separated by 153 nucleotides BWI76_RS07470: BWI76_RS07470 - MBL fold metallo-hydrolase, at 1,575,702 to 1,576,802 _RS07470 BWI76_RS07475: BWI76_RS07475 - DNA-binding transcriptional regulator RamA, at 1,576,835 to 1,577,176 _RS07475 BWI76_RS07480: BWI76_RS07480 - TonB-dependent siderophore receptor, at 1,577,213 to 1,579,357 _RS07480 BWI76_RS07485: BWI76_RS07485 - esterase, at 1,579,511 to 1,581,133 _RS07485 Position (kb) 1577 1578 1579 1580Strain fitness (log2 ratio) -2 -1 0 1 2at 1576.364 kb on + strand, within BWI76_RS07470at 1576.519 kb on - strand, within BWI76_RS07470at 1576.693 kb on + strandat 1576.703 kb on + strandat 1576.801 kb on + strandat 1576.969 kb on + strand, within BWI76_RS07475at 1577.368 kb on + strandat 1577.598 kb on + strand, within BWI76_RS07480at 1577.656 kb on - strand, within BWI76_RS07480at 1577.711 kb on + strand, within BWI76_RS07480at 1577.711 kb on + strand, within BWI76_RS07480at 1577.711 kb on + strand, within BWI76_RS07480at 1577.724 kb on + strand, within BWI76_RS07480at 1577.724 kb on + strand, within BWI76_RS07480at 1577.734 kb on + strand, within BWI76_RS07480at 1577.749 kb on + strand, within BWI76_RS07480at 1578.311 kb on - strand, within BWI76_RS07480at 1578.345 kb on - strand, within BWI76_RS07480at 1578.516 kb on - strand, within BWI76_RS07480at 1578.624 kb on - strand, within BWI76_RS07480at 1578.655 kb on - strand, within BWI76_RS07480at 1578.678 kb on + strand, within BWI76_RS07480at 1578.983 kb on - strand, within BWI76_RS07480at 1579.678 kb on + strand, within BWI76_RS07485at 1579.876 kb on + strand, within BWI76_RS07485at 1579.926 kb on + strand, within BWI76_RS07485at 1580.167 kb on + strand, within BWI76_RS07485at 1580.175 kb on - strand, within BWI76_RS07485at 1580.238 kb on + strand, within BWI76_RS07485at 1580.266 kb on - strand, within BWI76_RS07485at 1580.279 kb on + strand, within BWI76_RS07485at 1580.314 kb on + strand, within BWI76_RS07485

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
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1,576,364 + BWI76_RS07470 0.60 -0.3
1,576,519 - BWI76_RS07470 0.74 +0.1
1,576,693 + -0.1
1,576,703 + -1.3
1,576,801 + -1.9
1,576,969 + BWI76_RS07475 0.39 +0.2
1,577,368 + -2.3
1,577,598 + BWI76_RS07480 0.18 +0.2
1,577,656 - BWI76_RS07480 0.21 +0.1
1,577,711 + BWI76_RS07480 0.23 -0.2
1,577,711 + BWI76_RS07480 0.23 -0.7
1,577,711 + BWI76_RS07480 0.23 +0.8
1,577,724 + BWI76_RS07480 0.24 -0.2
1,577,724 + BWI76_RS07480 0.24 +0.3
1,577,734 + BWI76_RS07480 0.24 +0.5
1,577,749 + BWI76_RS07480 0.25 +0.4
1,578,311 - BWI76_RS07480 0.51 +1.2
1,578,345 - BWI76_RS07480 0.53 +0.7
1,578,516 - BWI76_RS07480 0.61 -0.0
1,578,624 - BWI76_RS07480 0.66 -2.6
1,578,655 - BWI76_RS07480 0.67 +0.5
1,578,678 + BWI76_RS07480 0.68 +1.8
1,578,983 - BWI76_RS07480 0.83 -0.2
1,579,678 + BWI76_RS07485 0.10 -2.6
1,579,876 + BWI76_RS07485 0.22 -0.5
1,579,926 + BWI76_RS07485 0.26 +0.8
1,580,167 + BWI76_RS07485 0.40 +0.7
1,580,175 - BWI76_RS07485 0.41 -0.9
1,580,238 + BWI76_RS07485 0.45 -1.5
1,580,266 - BWI76_RS07485 0.47 +0.3
1,580,279 + BWI76_RS07485 0.47 -0.8
1,580,314 + BWI76_RS07485 0.49 +0.4

Or see this region's nucleotide sequence