Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07355
Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,549,476 | - | BWI76_RS07350 | 0.85 | +0.9 | |
1,549,591 | + | +1.2 | |||
1,549,599 | - | +2.2 | |||
1,549,777 | - | +0.6 | |||
1,550,028 | + | -2.1 | |||
1,550,109 | + | -0.7 | |||
1,550,152 | - | -1.7 | |||
1,550,391 | + | BWI76_RS07355 | 0.19 | -0.9 | |
1,550,491 | - | BWI76_RS07355 | 0.23 | +0.2 | |
1,550,865 | - | BWI76_RS07355 | 0.40 | +0.6 | |
1,551,001 | - | BWI76_RS07355 | 0.47 | -0.0 | |
1,551,276 | + | BWI76_RS07355 | 0.59 | -0.1 | |
1,551,319 | + | BWI76_RS07355 | 0.61 | -0.4 | |
1,551,672 | + | BWI76_RS07355 | 0.77 | -0.2 | |
1,551,820 | + | BWI76_RS07355 | 0.84 | +0.9 | |
1,551,869 | + | BWI76_RS07355 | 0.86 | +0.2 | |
1,551,879 | + | BWI76_RS07355 | 0.87 | -0.1 | |
1,551,887 | - | BWI76_RS07355 | 0.87 | -0.9 | |
1,552,103 | + | -2.6 | |||
1,552,268 | + | +0.6 | |||
1,552,270 | - | -0.1 | |||
1,552,294 | + | +1.2 | |||
1,552,311 | - | +0.6 | |||
1,552,335 | - | -0.1 | |||
1,552,483 | + | BWI76_RS07360 | 0.12 | -0.4 | |
1,552,538 | + | BWI76_RS07360 | 0.16 | +0.6 | |
1,552,795 | + | BWI76_RS07360 | 0.35 | +0.9 | |
1,552,805 | + | BWI76_RS07360 | 0.36 | -1.9 | |
1,552,805 | + | BWI76_RS07360 | 0.36 | -1.1 | |
1,553,106 | + | BWI76_RS07360 | 0.58 | -2.3 |
Or see this region's nucleotide sequence