Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05510

Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS05500 and BWI76_RS05505 overlap by 8 nucleotidesBWI76_RS05505 and BWI76_RS05510 are separated by 6 nucleotidesBWI76_RS05510 and BWI76_RS05515 are separated by 11 nucleotides BWI76_RS05500: BWI76_RS05500 - NADH:ubiquinone reductase (Na(+)-transporting) subunit C, at 1,154,412 to 1,155,206 _RS05500 BWI76_RS05505: BWI76_RS05505 - NADH:ubiquinone reductase (Na(+)-transporting) subunit D, at 1,155,199 to 1,155,837 _RS05505 BWI76_RS05510: BWI76_RS05510 - NADH:ubiquinone reductase (Na(+)-transporting) subunit E, at 1,155,844 to 1,156,440 _RS05510 BWI76_RS05515: BWI76_RS05515 - NADH:ubiquinone reductase (Na(+)-transporting) subunit F, at 1,156,452 to 1,157,675 _RS05515 Position (kb) 1155 1156 1157Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1154.954 kb on + strand, within BWI76_RS05500at 1155.068 kb on + strand, within BWI76_RS05500at 1155.074 kb on - strand, within BWI76_RS05500at 1155.089 kb on + strand, within BWI76_RS05500at 1155.862 kb on - strandat 1156.033 kb on - strand, within BWI76_RS05510at 1156.158 kb on + strand, within BWI76_RS05510at 1156.158 kb on + strand, within BWI76_RS05510at 1156.166 kb on - strand, within BWI76_RS05510at 1156.375 kb on - strand, within BWI76_RS05510at 1156.375 kb on - strand, within BWI76_RS05510at 1156.511 kb on + strandat 1156.733 kb on + strand, within BWI76_RS05515at 1156.858 kb on - strand, within BWI76_RS05515at 1157.126 kb on - strand, within BWI76_RS05515at 1157.340 kb on + strand, within BWI76_RS05515

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
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1,154,954 + BWI76_RS05500 0.68 -3.6
1,155,068 + BWI76_RS05500 0.83 -4.2
1,155,074 - BWI76_RS05500 0.83 -3.1
1,155,089 + BWI76_RS05500 0.85 -4.1
1,155,862 - -0.8
1,156,033 - BWI76_RS05510 0.32 -1.6
1,156,158 + BWI76_RS05510 0.53 -0.9
1,156,158 + BWI76_RS05510 0.53 -2.8
1,156,166 - BWI76_RS05510 0.54 -2.5
1,156,375 - BWI76_RS05510 0.89 -1.4
1,156,375 - BWI76_RS05510 0.89 -3.8
1,156,511 + -3.5
1,156,733 + BWI76_RS05515 0.23 -4.1
1,156,858 - BWI76_RS05515 0.33 -0.6
1,157,126 - BWI76_RS05515 0.55 -3.7
1,157,340 + BWI76_RS05515 0.73 -3.5

Or see this region's nucleotide sequence