Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05490

Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS05485 and BWI76_RS05490 are separated by 413 nucleotidesBWI76_RS05490 and BWI76_RS05495 are separated by 3 nucleotides BWI76_RS05485: BWI76_RS05485 - transpeptidase, at 1,150,680 to 1,151,420 _RS05485 BWI76_RS05490: BWI76_RS05490 - Na(+)-translocating NADH-quinone reductase subunit A, at 1,151,834 to 1,153,177 _RS05490 BWI76_RS05495: BWI76_RS05495 - NADH:ubiquinone reductase (Na(+)-transporting) subunit B, at 1,153,181 to 1,154,419 _RS05495 Position (kb) 1151 1152 1153 1154Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2 3 4at 1151.107 kb on + strand, within BWI76_RS05485at 1151.179 kb on - strand, within BWI76_RS05485at 1151.179 kb on - strand, within BWI76_RS05485at 1151.186 kb on + strand, within BWI76_RS05485at 1151.214 kb on + strand, within BWI76_RS05485at 1151.284 kb on + strand, within BWI76_RS05485at 1151.299 kb on + strand, within BWI76_RS05485at 1151.341 kb on - strand, within BWI76_RS05485at 1151.518 kb on - strandat 1151.699 kb on + strandat 1151.707 kb on - strandat 1151.707 kb on - strandat 1151.707 kb on - strandat 1151.707 kb on - strandat 1151.944 kb on - strandat 1151.988 kb on + strand, within BWI76_RS05490at 1152.640 kb on + strand, within BWI76_RS05490at 1152.751 kb on - strand, within BWI76_RS05490at 1152.751 kb on - strand, within BWI76_RS05490at 1152.769 kb on + strand, within BWI76_RS05490at 1153.065 kb on + strandat 1153.136 kb on + strandat 1153.144 kb on - strandat 1153.384 kb on + strand, within BWI76_RS05495at 1153.392 kb on - strand, within BWI76_RS05495at 1153.401 kb on + strand, within BWI76_RS05495at 1153.401 kb on + strand, within BWI76_RS05495at 1153.404 kb on - strand, within BWI76_RS05495at 1153.491 kb on - strand, within BWI76_RS05495at 1153.548 kb on + strand, within BWI76_RS05495at 1153.574 kb on + strand, within BWI76_RS05495at 1153.582 kb on - strand, within BWI76_RS05495at 1153.665 kb on + strand, within BWI76_RS05495at 1153.673 kb on - strand, within BWI76_RS05495at 1153.852 kb on + strand, within BWI76_RS05495at 1154.081 kb on + strand, within BWI76_RS05495

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
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1,151,107 + BWI76_RS05485 0.58 +1.1
1,151,179 - BWI76_RS05485 0.67 -0.5
1,151,179 - BWI76_RS05485 0.67 +0.2
1,151,186 + BWI76_RS05485 0.68 -1.4
1,151,214 + BWI76_RS05485 0.72 -1.2
1,151,284 + BWI76_RS05485 0.82 +0.3
1,151,299 + BWI76_RS05485 0.84 +1.6
1,151,341 - BWI76_RS05485 0.89 -0.1
1,151,518 - +0.0
1,151,699 + +4.0
1,151,707 - -4.8
1,151,707 - -4.2
1,151,707 - -1.3
1,151,707 - -3.8
1,151,944 - -4.5
1,151,988 + BWI76_RS05490 0.11 -3.2
1,152,640 + BWI76_RS05490 0.60 -4.7
1,152,751 - BWI76_RS05490 0.68 -5.8
1,152,751 - BWI76_RS05490 0.68 -1.8
1,152,769 + BWI76_RS05490 0.70 -2.6
1,153,065 + -3.6
1,153,136 + -3.4
1,153,144 - -3.6
1,153,384 + BWI76_RS05495 0.16 -3.5
1,153,392 - BWI76_RS05495 0.17 -2.5
1,153,401 + BWI76_RS05495 0.18 -2.7
1,153,401 + BWI76_RS05495 0.18 -2.9
1,153,404 - BWI76_RS05495 0.18 -3.7
1,153,491 - BWI76_RS05495 0.25 -3.8
1,153,548 + BWI76_RS05495 0.30 -3.3
1,153,574 + BWI76_RS05495 0.32 -3.4
1,153,582 - BWI76_RS05495 0.32 -1.2
1,153,665 + BWI76_RS05495 0.39 -3.0
1,153,673 - BWI76_RS05495 0.40 -1.6
1,153,852 + BWI76_RS05495 0.54 -3.6
1,154,081 + BWI76_RS05495 0.73 -3.6

Or see this region's nucleotide sequence