Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01890 and BWI76_RS01895 are separated by 192 nucleotides BWI76_RS01895 and BWI76_RS01900 are separated by 107 nucleotides BWI76_RS01900 and BWI76_RS01905 are separated by 140 nucleotides BWI76_RS01905 and BWI76_RS01910 are separated by 177 nucleotides
BWI76_RS01890: BWI76_RS01890 - transcriptional regulator Zur, at 385,536 to 386,051
_RS01890
BWI76_RS01895: BWI76_RS01895 - cupin, at 386,244 to 386,732
_RS01895
BWI76_RS01900: BWI76_RS01900 - tRNA-dihydrouridine synthase A, at 386,840 to 387,835
_RS01900
BWI76_RS01905: BWI76_RS01905 - envelope stress response protein PspG, at 387,976 to 388,218
_RS01905
BWI76_RS01910: BWI76_RS01910 - quinone oxidoreductase, at 388,396 to 389,379
_RS01910
Position (kb) 386
387
388 Strain fitness (log2 ratio) -2
-1
0
1 at 385.913 kb on + strand, within BWI76_RS01890 at 385.921 kb on - strand, within BWI76_RS01890 at 385.921 kb on - strand, within BWI76_RS01890 at 385.937 kb on + strand, within BWI76_RS01890 at 386.040 kb on + strand at 386.186 kb on - strand at 386.208 kb on + strand at 386.209 kb on - strand at 386.213 kb on + strand at 386.295 kb on - strand, within BWI76_RS01895 at 386.314 kb on + strand, within BWI76_RS01895 at 386.322 kb on - strand, within BWI76_RS01895 at 386.475 kb on - strand, within BWI76_RS01895 at 387.444 kb on - strand, within BWI76_RS01900 at 387.475 kb on - strand, within BWI76_RS01900 at 387.505 kb on + strand, within BWI76_RS01900 at 387.657 kb on + strand, within BWI76_RS01900 at 387.675 kb on + strand, within BWI76_RS01900 at 387.795 kb on + strand at 387.911 kb on + strand at 388.065 kb on - strand, within BWI76_RS01905 at 388.072 kb on + strand, within BWI76_RS01905 at 388.292 kb on + strand at 388.337 kb on - strand at 388.337 kb on - strand at 388.379 kb on - strand at 388.380 kb on - strand at 388.677 kb on - strand, within BWI76_RS01910 at 388.735 kb on + strand, within BWI76_RS01910 at 388.795 kb on - strand, within BWI76_RS01910
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 385,913 + BWI76_RS01890 0.73 +1.2 385,921 - BWI76_RS01890 0.75 +0.2 385,921 - BWI76_RS01890 0.75 +0.2 385,937 + BWI76_RS01890 0.78 -1.8 386,040 + +1.2 386,186 - -1.2 386,208 + -0.6 386,209 - +1.3 386,213 + -0.1 386,295 - BWI76_RS01895 0.10 +0.8 386,314 + BWI76_RS01895 0.14 +0.7 386,322 - BWI76_RS01895 0.16 +0.4 386,475 - BWI76_RS01895 0.47 +0.9 387,444 - BWI76_RS01900 0.61 -2.1 387,475 - BWI76_RS01900 0.64 -2.2 387,505 + BWI76_RS01900 0.67 -2.5 387,657 + BWI76_RS01900 0.82 -2.3 387,675 + BWI76_RS01900 0.84 -2.6 387,795 + -2.4 387,911 + +0.7 388,065 - BWI76_RS01905 0.37 -0.8 388,072 + BWI76_RS01905 0.40 +0.3 388,292 + -0.4 388,337 - +0.6 388,337 - +0.5 388,379 - -2.3 388,380 - -0.9 388,677 - BWI76_RS01910 0.29 +0.3 388,735 + BWI76_RS01910 0.34 -1.9 388,795 - BWI76_RS01910 0.41 -0.4
Or see this region's nucleotide sequence