Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21625

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
4,873,395	+		PFLU_RS21615	0.83	-1.2
4,873,395	+		PFLU_RS21615	0.83	+0.7
4,873,396	-		PFLU_RS21615	0.84	-1.6
4,873,396	-		PFLU_RS21615	0.84	-1.8
4,873,396	-		PFLU_RS21615	0.84	-2.2
4,873,396	-		PFLU_RS21615	0.84	-2.4
4,873,420	+		PFLU_RS21615	0.89	-3.0
4,873,420	+		PFLU_RS21615	0.89	-2.6
4,873,421	-		PFLU_RS21615	0.89	-1.1
4,873,421	-		PFLU_RS21615	0.89	+1.5
4,873,421	-		PFLU_RS21615	0.89	+0.2
4,873,421	-		PFLU_RS21615	0.89	-0.6
4,873,445	+				-2.1
4,873,445	+				-0.6
4,873,445	+				+0.5
4,873,445	+				-0.8
4,873,446	-				-1.0
4,873,446	-				-1.5
4,873,446	-				+0.4
4,873,446	-				+0.7
4,873,468	+				-0.8
4,873,468	+				-0.5
4,873,468	+				-1.3
4,873,468	+				-2.8
4,873,468	+				-0.3
4,873,468	+				-2.3
4,873,468	+				-2.1
4,873,468	+				-0.0
4,873,468	+				-2.1
4,873,468	+				-0.5
4,873,468	+				-0.7
4,873,468	+				+0.2
4,873,468	+				-1.6
4,873,468	+				-2.3
4,873,468	+				-0.2
4,873,468	+				+1.2
4,873,468	+				-0.1
4,873,469	-				-1.3
4,873,469	-				-3.0
4,873,469	-				-0.0
4,873,469	-				-1.0
4,873,469	-				-3.0
4,873,469	-				-1.2
4,873,469	-				-0.6
4,873,469	-				-2.6
4,873,469	-				-2.7
4,873,469	-				-1.1
4,873,469	-				-3.8
4,873,474	+				-2.8
4,873,475	-				-1.0
4,873,500	+				-0.2
4,873,500	+				-1.2
4,873,500	+				-0.7
4,873,500	+				-0.6
4,873,500	+				-0.7
4,873,500	+				-0.3
4,873,500	+				-1.1
4,873,500	+				+2.1
4,873,500	+				-0.6
4,873,500	+				-0.3
4,873,500	+				-1.7
4,873,500	+				-1.8
4,873,500	+				+0.7
4,873,500	+				-1.8
4,873,500	+				-0.8
4,873,500	+				-2.2
4,873,500	+				-0.8
4,873,500	+				+0.5
4,873,501	-				-0.8
4,873,501	-				-0.5
4,873,501	-				-0.2
4,873,501	-				-0.3
4,873,501	-				+0.7
4,873,501	-				+0.4
4,873,501	-				-0.6
4,873,501	-				+1.5
4,873,501	-				+0.5
4,873,501	-				+0.3
4,873,501	-				+1.4
4,873,501	-				-0.0
4,873,501	-				+0.5
4,873,501	-				-0.3
4,873,501	-				-0.3
4,873,501	-				+1.0
4,873,501	-				+1.5
4,873,501	-				+0.2
4,873,501	-				-3.8
4,873,501	-				-3.4
4,873,501	-				-0.4
4,873,501	-				+0.3
4,873,502	+				-0.6
4,873,502	+				-2.8
4,873,502	+				-1.4
4,873,502	+				+0.2
4,873,503	-				+0.2
4,873,503	-				-2.4
4,873,503	-				+0.3
4,873,544	+				-1.0
4,873,544	+				-0.8
4,873,544	+				+0.5
4,873,544	+				+1.3
4,873,544	+				-1.1
4,873,544	+				-2.4
4,873,544	+				-1.7
4,873,544	+				+1.9
4,873,544	+				+0.7
4,873,545	-				+0.3
4,873,545	-				-0.6
4,873,545	-				-0.0
4,873,545	-				-0.4
4,873,545	-				-0.0
4,873,545	-				-2.7
4,873,620	+				-1.3
4,873,620	+				+0.2
4,873,620	+				-1.1
4,873,759	+		PFLU_RS21620	0.25	-1.4
4,873,759	+		PFLU_RS21620	0.25	-0.5
4,873,759	+		PFLU_RS21620	0.25	-2.4
4,873,759	+		PFLU_RS21620	0.25	+0.2
4,873,760	-		PFLU_RS21620	0.25	-0.3
4,873,760	-		PFLU_RS21620	0.25	-1.7
4,873,780	+		PFLU_RS21620	0.28	-0.5
4,873,780	+		PFLU_RS21620	0.28	-0.0
4,873,780	+		PFLU_RS21620	0.28	-1.1
4,873,780	+		PFLU_RS21620	0.28	+0.2
4,873,780	+		PFLU_RS21620	0.28	-0.5
4,873,780	+		PFLU_RS21620	0.28	-0.3
4,873,780	+		PFLU_RS21620	0.28	-0.7
4,873,781	-		PFLU_RS21620	0.28	-2.4
4,873,781	-		PFLU_RS21620	0.28	-0.6
4,873,781	-		PFLU_RS21620	0.28	-1.8
4,873,781	-		PFLU_RS21620	0.28	+0.7
4,873,781	-		PFLU_RS21620	0.28	+0.3
4,873,781	-		PFLU_RS21620	0.28	+1.3
4,873,781	-		PFLU_RS21620	0.28	+1.6
4,873,850	+		PFLU_RS21620	0.36	-1.3
4,873,850	+		PFLU_RS21620	0.36	-0.8
4,873,850	+		PFLU_RS21620	0.36	-1.8
4,873,850	+		PFLU_RS21620	0.36	+2.5
4,873,850	+		PFLU_RS21620	0.36	-0.6
4,873,850	+		PFLU_RS21620	0.36	-1.1
4,873,851	-		PFLU_RS21620	0.37	+0.4
4,873,851	-		PFLU_RS21620	0.37	-0.4
4,873,851	-		PFLU_RS21620	0.37	-1.4
4,873,851	-		PFLU_RS21620	0.37	+3.3
4,873,851	-		PFLU_RS21620	0.37	+1.2
4,873,936	+		PFLU_RS21620	0.47	+1.0
4,873,936	+		PFLU_RS21620	0.47	+0.0
4,873,936	+		PFLU_RS21620	0.47	-1.8
4,873,937	-		PFLU_RS21620	0.47	-2.9
4,873,937	-		PFLU_RS21620	0.47	-1.1
4,873,937	-		PFLU_RS21620	0.47	-0.0
4,874,308	+				+1.0
4,874,308	+				-0.1
4,874,309	-				-1.1
4,874,422	-				-1.4
4,874,507	+		PFLU_RS21625	0.18	-0.3
4,874,507	+		PFLU_RS21625	0.18	+0.6
4,874,508	-		PFLU_RS21625	0.18	-0.3
4,874,508	-		PFLU_RS21625	0.18	-0.1
4,874,508	-		PFLU_RS21625	0.18	+0.3
4,874,508	-		PFLU_RS21625	0.18	-1.5
4,874,511	+		PFLU_RS21625	0.18	-1.1
4,874,511	+		PFLU_RS21625	0.18	-2.1
4,874,511	+		PFLU_RS21625	0.18	-2.6
4,874,511	+		PFLU_RS21625	0.18	+0.2
4,874,511	+		PFLU_RS21625	0.18	+0.6
4,874,511	+		PFLU_RS21625	0.18	-2.7
4,874,511	+		PFLU_RS21625	0.18	-3.4
4,874,511	+		PFLU_RS21625	0.18	-0.6
4,874,511	+		PFLU_RS21625	0.18	+0.2
4,874,511	+		PFLU_RS21625	0.18	-0.9
4,874,511	+		PFLU_RS21625	0.18	-2.3
4,874,511	+		PFLU_RS21625	0.18	-2.0
4,874,511	+		PFLU_RS21625	0.18	-2.0
4,874,512	-		PFLU_RS21625	0.19	-2.0
4,874,512	-		PFLU_RS21625	0.19	+0.5
4,874,512	-		PFLU_RS21625	0.19	+0.3
4,874,512	-		PFLU_RS21625	0.19	+0.4
4,874,512	-		PFLU_RS21625	0.19	+1.0
4,874,512	-		PFLU_RS21625	0.19	+0.7
4,874,512	-		PFLU_RS21625	0.19	-0.2
4,874,512	-		PFLU_RS21625	0.19	-1.7
4,874,512	-		PFLU_RS21625	0.19	-0.3
4,874,512	-		PFLU_RS21625	0.19	+0.3
4,874,512	-		PFLU_RS21625	0.19	+0.0
4,874,549	+		PFLU_RS21625	0.23	-2.1
4,874,549	+		PFLU_RS21625	0.23	+0.4
4,874,610	+		PFLU_RS21625	0.31	-0.6
4,874,610	+		PFLU_RS21625	0.31	-2.4
4,874,610	+		PFLU_RS21625	0.31	+0.1
4,874,610	+		PFLU_RS21625	0.31	-1.0
4,874,610	+		PFLU_RS21625	0.31	-0.9
4,874,610	+		PFLU_RS21625	0.31	-0.3
4,874,626	+		PFLU_RS21625	0.33	-2.8
4,874,662	+		PFLU_RS21625	0.38	-1.9
4,874,662	+		PFLU_RS21625	0.38	-2.1
4,874,662	+		PFLU_RS21625	0.38	-0.4
4,874,663	-		PFLU_RS21625	0.38	+0.7
4,874,773	+		PFLU_RS21625	0.52	-2.5
4,874,976	+		PFLU_RS21625	0.77	-2.4
4,874,976	+		PFLU_RS21625	0.77	-0.2
4,874,976	+		PFLU_RS21625	0.77	-0.9
4,874,976	+		PFLU_RS21625	0.77	-1.0
4,874,976	+		PFLU_RS21625	0.77	-1.1
4,874,977	-		PFLU_RS21625	0.77	-0.4
4,874,977	-		PFLU_RS21625	0.77	-2.0
4,874,977	-		PFLU_RS21625	0.77	-1.3
4,874,977	-		PFLU_RS21625	0.77	-0.3
4,874,977	-		PFLU_RS21625	0.77	+1.0
4,874,977	-		PFLU_RS21625	0.77	-0.3
4,875,007	-		PFLU_RS21625	0.81	-0.3
4,875,015	+		PFLU_RS21625	0.82	-1.4
4,875,015	+		PFLU_RS21625	0.82	-1.5
4,875,015	+		PFLU_RS21625	0.82	-3.4
4,875,015	+		PFLU_RS21625	0.82	+0.5
4,875,015	+		PFLU_RS21625	0.82	-2.3
4,875,015	+		PFLU_RS21625	0.82	-2.0
4,875,015	+		PFLU_RS21625	0.82	-1.4
4,875,016	-		PFLU_RS21625	0.82	-1.4
4,875,016	-		PFLU_RS21625	0.82	-2.1
4,875,016	-		PFLU_RS21625	0.82	-0.3
4,875,016	-		PFLU_RS21625	0.82	+0.7
4,875,016	-		PFLU_RS21625	0.82	-1.4
4,875,201	+				+1.0
4,875,201	+				-0.9
4,875,201	+				+0.5
4,875,201	+				-0.9
4,875,201	+				+1.4
4,875,201	+				-0.1
4,875,201	+				-1.2
4,875,201	+				-2.0
4,875,201	+				-0.6
4,875,201	+				-0.8
4,875,201	+				-3.5
4,875,201	+				-0.8
4,875,201	+				-0.6
4,875,201	+				+1.4
4,875,201	+				-1.4
4,875,201	+				-0.8
4,875,201	+				-0.3
4,875,201	+				-1.1
4,875,201	+				-0.6
4,875,201	+				+3.7
4,875,201	+				-1.1
4,875,202	-				+0.4
4,875,202	-				-0.7
4,875,202	-				+2.1
4,875,202	-				+1.0
4,875,202	-				-1.3
4,875,202	-				+0.7
4,875,202	-				+1.5
4,875,202	-				-0.1
4,875,202	-				-0.3
4,875,202	-				+0.2
4,875,202	-				+0.6
4,875,202	-				-0.6
4,875,202	-				-0.1
4,875,202	-				+0.3
4,875,202	-				-1.5
4,875,202	-				+1.5
4,875,202	-				-1.1
4,875,202	-				+0.3
4,875,202	-				+0.0
4,875,206	+				-0.1
4,875,206	+				-0.6
4,875,207	-				-1.1
4,875,346	+		PFLU_RS21630	0.16	-1.7
4,875,346	+		PFLU_RS21630	0.16	-0.5
4,875,346	+		PFLU_RS21630	0.16	-2.7
4,875,346	+		PFLU_RS21630	0.16	-1.3
4,875,346	+		PFLU_RS21630	0.16	-0.4
4,875,346	+		PFLU_RS21630	0.16	-2.4
4,875,347	-		PFLU_RS21630	0.16	-0.1
4,875,347	-		PFLU_RS21630	0.16	-1.4
4,875,347	-		PFLU_RS21630	0.16	-2.3
4,875,347	-		PFLU_RS21630	0.16	+0.2
4,875,347	-		PFLU_RS21630	0.16	-1.9
4,875,347	-		PFLU_RS21630	0.16	-1.4
4,875,347	-		PFLU_RS21630	0.16	-1.8
4,875,347	-		PFLU_RS21630	0.16	+0.0
4,875,347	-		PFLU_RS21630	0.16	-0.6
4,875,347	-		PFLU_RS21630	0.16	-1.8
4,875,571	-		PFLU_RS21630	0.41	+0.1
4,875,571	-		PFLU_RS21630	0.41	-0.9
4,875,636	+		PFLU_RS21630	0.49	-2.8
4,875,636	+		PFLU_RS21630	0.49	+0.2
4,875,636	+		PFLU_RS21630	0.49	-1.8
4,875,637	-		PFLU_RS21630	0.49	-2.3
4,875,747	+		PFLU_RS21630	0.61	+0.7
4,875,747	+		PFLU_RS21630	0.61	-1.7
4,875,747	+		PFLU_RS21630	0.61	+2.2
4,875,748	-		PFLU_RS21630	0.61	-3.0
4,875,748	-		PFLU_RS21630	0.61	-2.4
4,875,956	+		PFLU_RS21630	0.85	-3.3
4,875,956	+		PFLU_RS21630	0.85	-0.2
4,875,956	+		PFLU_RS21630	0.85	-0.1
4,875,956	+		PFLU_RS21630	0.85	-2.3
4,875,956	+		PFLU_RS21630	0.85	-0.3
4,875,956	+		PFLU_RS21630	0.85	+0.4
4,875,956	+		PFLU_RS21630	0.85	-1.0
4,875,956	+		PFLU_RS21630	0.85	-0.6
4,875,956	+		PFLU_RS21630	0.85	-0.6
4,875,957	-		PFLU_RS21630	0.85	-1.7
4,875,957	-		PFLU_RS21630	0.85	-2.3
4,875,957	-		PFLU_RS21630	0.85	-0.8
4,875,957	-		PFLU_RS21630	0.85	-0.1
4,875,957	-		PFLU_RS21630	0.85	-1.9
4,875,957	-		PFLU_RS21630	0.85	-0.7
4,875,957	-		PFLU_RS21630	0.85	-1.4
4,875,986	+		PFLU_RS21630	0.88	+0.5
4,875,986	+		PFLU_RS21630	0.88	-2.7
4,875,986	+		PFLU_RS21630	0.88	-0.7
4,875,986	+		PFLU_RS21630	0.88	+0.3
4,875,986	+		PFLU_RS21630	0.88	-0.5
4,875,986	+		PFLU_RS21630	0.88	-2.7
4,875,986	+		PFLU_RS21630	0.88	-0.7
4,875,986	+		PFLU_RS21630	0.88	+0.1
4,875,986	+		PFLU_RS21630	0.88	+0.2
4,875,986	+		PFLU_RS21630	0.88	-0.3
4,875,986	+		PFLU_RS21630	0.88	-1.1
4,875,986	+		PFLU_RS21630	0.88	-2.7
4,875,986	+		PFLU_RS21630	0.88	-0.4
4,875,986	+		PFLU_RS21630	0.88	+0.3
4,875,986	+		PFLU_RS21630	0.88	-1.5
4,875,986	+		PFLU_RS21630	0.88	-0.2
4,875,986	+		PFLU_RS21630	0.88	-3.4
4,875,986	+		PFLU_RS21630	0.88	-1.2
4,875,987	-		PFLU_RS21630	0.88	+0.2
4,875,987	-		PFLU_RS21630	0.88	-2.7
4,875,987	-		PFLU_RS21630	0.88	-2.5
4,875,987	-		PFLU_RS21630	0.88	-1.3
4,875,987	-		PFLU_RS21630	0.88	-3.5
4,875,987	-		PFLU_RS21630	0.88	-0.8
4,875,987	-		PFLU_RS21630	0.88	-0.4
4,875,987	-		PFLU_RS21630	0.88	-1.6
4,875,987	-		PFLU_RS21630	0.88	-0.3
4,875,987	-		PFLU_RS21630	0.88	-1.2
4,875,987	-		PFLU_RS21630	0.88	+0.4
4,875,987	-		PFLU_RS21630	0.88	-1.7
4,875,987	-		PFLU_RS21630	0.88	-2.7
4,875,987	-		PFLU_RS21630	0.88	-0.6
4,876,031	+				-1.8
4,876,032	-				-2.8
4,876,100	+				-0.4
4,876,100	+				-0.7
4,876,100	+				-1.1
4,876,100	+				-1.6
4,876,100	+				-0.6
4,876,100	+				+0.3
4,876,100	+				-2.5
4,876,100	+				-1.7
4,876,100	+				-0.5
4,876,100	+				-2.1
4,876,101	-				-2.2
4,876,101	-				+0.1
4,876,101	-				+1.7
4,876,101	-				-0.7
4,876,101	-				-0.4
4,876,101	-				+1.2
4,876,101	-				-0.5
4,876,101	-				-0.7
4,876,101	-				+0.5
4,876,101	-				-2.8
4,876,101	-				-1.4
4,876,101	-				+0.9
4,876,101	-				-1.0
4,876,101	-				+3.3
4,876,101	-				-0.3
4,876,101	-				-3.0