Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23940
Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL |
---|---|---|---|---|---|
remove | |||||
4,996,117 | - | BWI76_RS23935 | 0.55 | +0.7 | |
4,996,176 | + | BWI76_RS23935 | 0.57 | +0.7 | |
4,996,298 | - | BWI76_RS23935 | 0.63 | -1.9 | |
4,996,367 | + | BWI76_RS23935 | 0.66 | -0.0 | |
4,996,375 | - | BWI76_RS23935 | 0.67 | +0.8 | |
4,996,454 | + | BWI76_RS23935 | 0.70 | +0.3 | |
4,996,528 | - | BWI76_RS23935 | 0.74 | -1.3 | |
4,996,587 | + | BWI76_RS23935 | 0.76 | +0.1 | |
4,996,781 | + | BWI76_RS23935 | 0.86 | +1.0 | |
4,996,795 | - | BWI76_RS23935 | 0.86 | -0.2 | |
4,996,909 | - | -0.8 | |||
4,997,038 | + | -0.5 | |||
4,997,148 | - | +0.7 | |||
4,997,426 | + | BWI76_RS23940 | 0.34 | +0.0 | |
4,997,519 | + | BWI76_RS23940 | 0.44 | -0.1 | |
4,997,519 | + | BWI76_RS23940 | 0.44 | -0.1 | |
4,997,701 | - | BWI76_RS23940 | 0.62 | +0.4 | |
4,997,701 | - | BWI76_RS23940 | 0.62 | -1.0 | |
4,997,947 | + | BWI76_RS23940 | 0.87 | -0.9 | |
4,998,334 | - | BWI76_RS23945 | 0.31 | +0.3 | |
4,998,407 | + | BWI76_RS23945 | 0.40 | +1.3 | |
4,998,806 | - | -0.1 | |||
4,998,891 | - | -1.2 | |||
4,998,891 | - | +0.3 | |||
4,998,891 | - | -0.9 |
Or see this region's nucleotide sequence