Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23930
Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL |
---|---|---|---|---|---|
remove | |||||
4,993,048 | + | -2.5 | |||
4,993,057 | + | -0.6 | |||
4,993,407 | + | BWI76_RS23925 | 0.58 | -1.3 | |
4,993,628 | + | -0.0 | |||
4,993,845 | + | -1.0 | |||
4,993,877 | - | +0.9 | |||
4,993,885 | - | +0.3 | |||
4,993,904 | + | +1.0 | |||
4,994,015 | + | BWI76_RS23930 | 0.18 | -0.2 | |
4,994,269 | + | BWI76_RS23930 | 0.46 | -0.2 | |
4,994,288 | + | BWI76_RS23930 | 0.48 | -0.9 | |
4,994,357 | + | BWI76_RS23930 | 0.56 | -1.4 | |
4,994,402 | + | BWI76_RS23930 | 0.61 | -3.1 | |
4,994,750 | - | -0.3 | |||
4,995,167 | - | BWI76_RS23935 | 0.10 | +0.8 | |
4,995,167 | - | BWI76_RS23935 | 0.10 | +1.1 | |
4,995,167 | - | BWI76_RS23935 | 0.10 | +0.7 | |
4,995,167 | - | BWI76_RS23935 | 0.10 | +0.1 | |
4,995,212 | - | BWI76_RS23935 | 0.12 | -0.4 | |
4,995,259 | + | BWI76_RS23935 | 0.15 | +0.3 | |
4,995,419 | + | BWI76_RS23935 | 0.22 | -0.7 | |
4,995,476 | + | BWI76_RS23935 | 0.25 | -0.7 | |
4,995,525 | + | BWI76_RS23935 | 0.27 | +1.0 | |
4,995,631 | - | BWI76_RS23935 | 0.32 | -0.1 | |
4,995,668 | - | BWI76_RS23935 | 0.34 | +0.7 |
Or see this region's nucleotide sequence