Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15340
Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,211,850 | + | BWI76_RS15335 | 0.59 | +0.7 | |
3,211,885 | - | BWI76_RS15335 | 0.61 | -0.2 | |
3,212,101 | + | BWI76_RS15335 | 0.75 | +1.2 | |
3,212,534 | + | -2.0 | |||
3,212,758 | + | BWI76_RS15340 | 0.14 | -1.7 | |
3,213,004 | - | BWI76_RS15340 | 0.34 | -0.2 | |
3,213,110 | - | BWI76_RS15340 | 0.42 | -0.6 | |
3,213,476 | - | BWI76_RS15340 | 0.71 | -1.6 | |
3,213,488 | - | BWI76_RS15340 | 0.72 | -1.2 | |
3,213,794 | + | -0.3 | |||
3,213,795 | - | +0.0 | |||
3,213,797 | + | -0.3 | |||
3,213,856 | + | +0.6 | |||
3,213,856 | + | +1.1 | |||
3,213,856 | + | +0.4 | |||
3,213,864 | - | +1.2 | |||
3,213,864 | - | +0.6 | |||
3,213,957 | - | +0.8 | |||
3,214,012 | + | -2.3 | |||
3,214,033 | - | -0.1 | |||
3,214,040 | - | -0.1 | |||
3,214,159 | - | BWI76_RS15345 | 0.12 | +0.4 | |
3,214,451 | + | BWI76_RS15345 | 0.39 | +0.5 | |
3,214,489 | + | BWI76_RS15345 | 0.42 | -2.1 | |
3,214,554 | - | BWI76_RS15345 | 0.48 | -0.3 | |
3,214,844 | - | BWI76_RS15345 | 0.74 | +0.3 |
Or see this region's nucleotide sequence