Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11695 and BWI76_RS11700 are separated by 208 nucleotides BWI76_RS11700 and BWI76_RS11705 are separated by 4 nucleotides BWI76_RS11705 and BWI76_RS11710 are separated by 34 nucleotides BWI76_RS11710 and BWI76_RS11715 are separated by 102 nucleotides
BWI76_RS11695: BWI76_RS11695 - ATP-independent periplasmic protein-refolding chaperone, at 2,461,237 to 2,461,719
_RS11695
BWI76_RS11700: BWI76_RS11700 - hypothetical protein, at 2,461,928 to 2,462,470
_RS11700
BWI76_RS11705: BWI76_RS11705 - hypothetical protein, at 2,462,475 to 2,464,517
_RS11705
BWI76_RS11710: BWI76_RS11710 - nucleotide excision repair endonuclease, at 2,464,552 to 2,465,412
_RS11710
BWI76_RS11715: BWI76_RS11715 - NAD(+) synthetase, at 2,465,515 to 2,466,342
_RS11715
Position (kb)
2462
2463
2464
2465 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2461.479 kb on - strand, within BWI76_RS11695 at 2461.480 kb on - strand, within BWI76_RS11695 at 2461.535 kb on - strand, within BWI76_RS11695 at 2461.554 kb on + strand, within BWI76_RS11695 at 2461.579 kb on + strand, within BWI76_RS11695 at 2461.714 kb on + strand at 2461.714 kb on + strand at 2461.731 kb on + strand at 2461.777 kb on - strand at 2461.777 kb on - strand at 2461.777 kb on - strand at 2461.777 kb on - strand at 2461.857 kb on - strand at 2461.869 kb on - strand at 2462.037 kb on + strand, within BWI76_RS11700 at 2462.426 kb on + strand at 2462.634 kb on + strand at 2462.979 kb on + strand, within BWI76_RS11705 at 2463.547 kb on - strand, within BWI76_RS11705 at 2463.739 kb on + strand, within BWI76_RS11705 at 2464.134 kb on - strand, within BWI76_RS11705 at 2464.152 kb on + strand, within BWI76_RS11705 at 2464.354 kb on + strand at 2464.364 kb on + strand at 2464.364 kb on - strand at 2464.443 kb on - strand at 2464.458 kb on - strand at 2464.567 kb on - strand at 2464.988 kb on - strand, within BWI76_RS11710 at 2465.039 kb on - strand, within BWI76_RS11710 at 2465.052 kb on + strand, within BWI76_RS11710 at 2465.137 kb on - strand, within BWI76_RS11710
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL remove 2,461,479 - BWI76_RS11695 0.50 -0.0 2,461,480 - BWI76_RS11695 0.50 -1.9 2,461,535 - BWI76_RS11695 0.62 +1.4 2,461,554 + BWI76_RS11695 0.66 +0.6 2,461,579 + BWI76_RS11695 0.71 +1.0 2,461,714 + +0.7 2,461,714 + +0.5 2,461,731 + -0.6 2,461,777 - -2.3 2,461,777 - +1.4 2,461,777 - +0.2 2,461,777 - -0.3 2,461,857 - +2.3 2,461,869 - -0.7 2,462,037 + BWI76_RS11700 0.20 +1.7 2,462,426 + +0.1 2,462,634 + +1.0 2,462,979 + BWI76_RS11705 0.25 -0.2 2,463,547 - BWI76_RS11705 0.52 +1.5 2,463,739 + BWI76_RS11705 0.62 -2.4 2,464,134 - BWI76_RS11705 0.81 +1.2 2,464,152 + BWI76_RS11705 0.82 +0.7 2,464,354 + +0.4 2,464,364 + +1.4 2,464,364 - +0.5 2,464,443 - +1.0 2,464,458 - +0.5 2,464,567 - +1.2 2,464,988 - BWI76_RS11710 0.51 +0.5 2,465,039 - BWI76_RS11710 0.57 +0.5 2,465,052 + BWI76_RS11710 0.58 +0.9 2,465,137 - BWI76_RS11710 0.68 -0.5
Or see this region's nucleotide sequence