Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10475
Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL |
---|---|---|---|---|---|
remove | |||||
2,211,929 | - | BWI76_RS10470 | 0.17 | -0.5 | |
2,211,937 | + | BWI76_RS10470 | 0.18 | -2.1 | |
2,211,945 | - | BWI76_RS10470 | 0.19 | -0.3 | |
2,212,080 | + | BWI76_RS10470 | 0.32 | +0.2 | |
2,212,687 | + | -1.7 | |||
2,212,801 | + | +1.0 | |||
2,212,889 | + | -1.8 | |||
2,213,006 | + | BWI76_RS10475 | 0.13 | -1.6 | |
2,213,299 | + | BWI76_RS10475 | 0.32 | -2.5 | |
2,213,357 | - | BWI76_RS10475 | 0.36 | -1.3 | |
2,213,968 | - | BWI76_RS10475 | 0.74 | -3.5 | |
2,214,160 | + | BWI76_RS10475 | 0.87 | -2.0 | |
2,214,242 | + | -3.7 | |||
2,214,616 | + | BWI76_RS10480 | 0.24 | -3.1 | |
2,214,725 | + | BWI76_RS10480 | 0.34 | -0.5 | |
2,214,753 | + | BWI76_RS10480 | 0.37 | +1.4 | |
2,214,787 | - | BWI76_RS10480 | 0.41 | -0.9 | |
2,214,854 | - | BWI76_RS10480 | 0.47 | -2.7 | |
2,214,915 | + | BWI76_RS10480 | 0.53 | +0.9 | |
2,214,923 | - | BWI76_RS10480 | 0.54 | -2.3 | |
2,214,941 | + | BWI76_RS10480 | 0.55 | -1.3 | |
2,214,978 | + | BWI76_RS10480 | 0.59 | -1.4 | |
2,215,011 | + | BWI76_RS10480 | 0.62 | -1.0 | |
2,215,029 | + | BWI76_RS10480 | 0.64 | -0.0 | |
2,215,037 | - | BWI76_RS10480 | 0.65 | -4.4 | |
2,215,037 | - | +0.0 | |||
2,215,197 | + | BWI76_RS10480 | 0.80 | +0.7 | |
2,215,358 | + | -0.9 |
Or see this region's nucleotide sequence