Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01025
Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL |
|---|---|---|---|---|---|
| remove | |||||
| 209,478 | + | -0.4 | |||
| 209,635 | + | BWI76_RS01025 | 0.12 | -0.4 | |
| 209,705 | + | BWI76_RS01025 | 0.20 | -2.6 | |
| 209,713 | - | BWI76_RS01025 | 0.21 | +1.9 | |
| 209,829 | - | BWI76_RS01025 | 0.33 | +0.7 | |
| 209,848 | + | BWI76_RS01025 | 0.35 | +1.5 | |
| 209,865 | - | BWI76_RS01025 | 0.36 | -2.7 | |
| 209,865 | - | BWI76_RS01025 | 0.36 | +0.5 | |
| 209,865 | - | BWI76_RS01025 | 0.36 | -1.4 | |
| 210,021 | + | BWI76_RS01025 | 0.53 | +0.6 | |
| 210,031 | + | BWI76_RS01025 | 0.54 | +0.3 | |
| 210,034 | - | BWI76_RS01025 | 0.54 | +0.3 | |
| 210,065 | + | BWI76_RS01025 | 0.57 | -1.2 | |
| 210,128 | - | BWI76_RS01025 | 0.64 | +1.5 | |
| 210,128 | - | BWI76_RS01025 | 0.64 | +0.5 | |
| 210,462 | - | +1.2 | |||
| 210,549 | + | -0.1 | |||
| 210,649 | + | BWI76_RS01030 | 0.13 | +1.6 | |
| 210,652 | - | BWI76_RS01030 | 0.13 | -0.1 | |
| 210,662 | - | BWI76_RS01030 | 0.14 | +0.4 | |
| 210,677 | + | BWI76_RS01030 | 0.15 | -0.5 | |
| 210,757 | + | BWI76_RS01030 | 0.21 | +0.2 | |
| 211,104 | + | BWI76_RS01030 | 0.45 | -0.4 | |
| 211,256 | - | BWI76_RS01030 | 0.56 | -0.4 | |
| 211,441 | + | BWI76_RS01030 | 0.69 | +1.0 |
Or see this region's nucleotide sequence