Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17845

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
4,051,491	+		PFLU_RS17840	0.45	-0.7
4,051,492	-		PFLU_RS17840	0.45	+0.7
4,051,537	-		PFLU_RS17840	0.48	+0.1
4,051,943	+		PFLU_RS17840	0.77	+0.7
4,051,944	-		PFLU_RS17840	0.77	+0.2
4,052,061	+		PFLU_RS17840	0.86	-0.9
4,052,061	+		PFLU_RS17840	0.86	+0.0
4,052,061	+		PFLU_RS17840	0.86	-0.2
4,052,062	-		PFLU_RS17840	0.86	-0.7
4,052,062	-		PFLU_RS17840	0.86	+0.3
4,052,062	-		PFLU_RS17840	0.86	-0.4
4,052,178	+				+2.1
4,052,178	+				+0.6
4,052,178	+				+0.3
4,052,178	+				-0.4
4,052,178	+				+0.0
4,052,178	+				+1.6
4,052,179	-				-0.9
4,052,179	-				+0.6
4,052,186	+				+0.8
4,052,186	+				-0.4
4,052,187	-				+0.1
4,052,187	-				+0.6
4,052,187	-				-1.0
4,052,187	-				+0.1
4,052,187	-				-0.9
4,052,235	-				-0.3
4,052,243	-				-0.1
4,052,252	+				-0.2
4,052,253	-				+1.6
4,052,253	-				+1.1
4,052,256	+				-1.8
4,052,256	+				-1.7
4,052,256	+				+0.9
4,052,256	+				-0.6
4,052,256	+				-1.3
4,052,257	-				+1.1
4,052,257	-				+0.3
4,052,257	-				+0.1
4,052,257	-				+0.1
4,052,257	-				-0.0
4,052,257	-				-1.0
4,052,307	+				+0.8
4,052,308	-				+0.7
4,052,308	-				-0.1
4,052,373	+				+0.3
4,052,373	+				+1.3
4,052,373	+				+0.5
4,052,374	-				-0.9
4,052,374	-				-0.4
4,052,388	+				-0.4
4,052,388	+				-0.0
4,052,388	+				+0.3
4,052,388	+				+1.1
4,052,389	-				-1.7
4,052,389	-				+0.9
4,052,402	+				-2.4
4,052,402	+				+0.4
4,052,403	-				-1.2
4,052,470	+				-0.8
4,052,471	-				-2.9
4,052,623	+				+0.1
4,052,623	+				-0.1
4,052,623	+				-1.7
4,052,623	+				-1.4
4,052,623	+				+1.0
4,052,624	-				+0.9
4,052,624	-				+0.9
4,052,700	+		PFLU_RS17845	0.12	+1.5
4,052,700	+		PFLU_RS17845	0.12	+0.7
4,052,700	+		PFLU_RS17845	0.12	-0.1
4,052,700	+		PFLU_RS17845	0.12	-2.7
4,052,700	+		PFLU_RS17845	0.12	+1.1
4,052,700	+		PFLU_RS17845	0.12	+0.7
4,052,700	+		PFLU_RS17845	0.12	-1.9
4,052,701	-		PFLU_RS17845	0.12	-0.7
4,052,701	-		PFLU_RS17845	0.12	-0.8
4,052,701	-		PFLU_RS17845	0.12	+0.5
4,052,701	-		PFLU_RS17845	0.12	-0.8
4,052,701	-		PFLU_RS17845	0.12	+1.1
4,052,701	-		PFLU_RS17845	0.12	-0.9
4,052,701	-		PFLU_RS17845	0.12	+0.2
4,052,759	-		PFLU_RS17845	0.15	+2.0
4,052,759	-		PFLU_RS17845	0.15	+0.4
4,052,806	+		PFLU_RS17845	0.18	-0.3
4,052,807	-		PFLU_RS17845	0.18	-0.1
4,052,817	-		PFLU_RS17845	0.18	-0.7
4,052,817	-		PFLU_RS17845	0.18	-0.6
4,052,817	-		PFLU_RS17845	0.18	-0.2
4,052,817	-		PFLU_RS17845	0.18	+0.6
4,052,817	-		PFLU_RS17845	0.18	-0.3
4,052,881	+		PFLU_RS17845	0.21	+1.1
4,052,882	-		PFLU_RS17845	0.21	-0.1
4,052,953	+		PFLU_RS17845	0.25	+1.5
4,052,953	+		PFLU_RS17845	0.25	-0.6
4,052,953	+		PFLU_RS17845	0.25	+1.5
4,052,953	+		PFLU_RS17845	0.25	-0.1
4,052,953	+		PFLU_RS17845	0.25	-0.1
4,052,953	+		PFLU_RS17845	0.25	-0.5
4,052,953	+		PFLU_RS17845	0.25	+0.9
4,052,954	-		PFLU_RS17845	0.25	+1.1
4,052,954	-		PFLU_RS17845	0.25	-1.2
4,052,977	+		PFLU_RS17845	0.26	-0.5
4,052,977	+		PFLU_RS17845	0.26	-0.9
4,052,977	+		PFLU_RS17845	0.26	-0.9
4,052,978	-		PFLU_RS17845	0.26	-0.4
4,052,989	+		PFLU_RS17845	0.26	+1.1
4,053,061	+		PFLU_RS17845	0.30	+0.1
4,053,061	+		PFLU_RS17845	0.30	+0.3
4,053,061	+		PFLU_RS17845	0.30	+0.1
4,053,061	+		PFLU_RS17845	0.30	+1.0
4,053,061	+		PFLU_RS17845	0.30	-1.4
4,053,061	+		PFLU_RS17845	0.30	-1.4
4,053,061	+		PFLU_RS17845	0.30	+1.1
4,053,061	+		PFLU_RS17845	0.30	-0.6
4,053,062	-		PFLU_RS17845	0.30	-0.3
4,053,062	-		PFLU_RS17845	0.30	-0.9
4,053,062	-		PFLU_RS17845	0.30	+0.9
4,053,109	+		PFLU_RS17845	0.32	-0.9
4,053,109	+		PFLU_RS17845	0.32	-1.7
4,053,109	+		PFLU_RS17845	0.32	-0.2
4,053,109	+		PFLU_RS17845	0.32	+0.9
4,053,109	+		PFLU_RS17845	0.32	+1.6
4,053,110	-		PFLU_RS17845	0.32	-1.4
4,053,110	-		PFLU_RS17845	0.32	+0.8
4,053,113	+		PFLU_RS17845	0.32	+0.2
4,053,113	+		PFLU_RS17845	0.32	-1.6
4,053,114	-		PFLU_RS17845	0.32	-0.9
4,053,124	+		PFLU_RS17845	0.33	+0.0
4,053,124	+		PFLU_RS17845	0.33	+0.1
4,053,124	+		PFLU_RS17845	0.33	+1.1
4,053,125	-		PFLU_RS17845	0.33	-0.2
4,053,125	-		PFLU_RS17845	0.33	-0.1
4,053,132	+		PFLU_RS17845	0.33	-0.4
4,053,132	+		PFLU_RS17845	0.33	-0.9
4,053,132	+		PFLU_RS17845	0.33	-0.0
4,053,214	+		PFLU_RS17845	0.37	+0.4
4,053,214	+		PFLU_RS17845	0.37	+0.6
4,053,214	+		PFLU_RS17845	0.37	-0.1
4,053,215	-		PFLU_RS17845	0.37	+0.7
4,053,268	+		PFLU_RS17845	0.40	+0.9
4,053,269	-		PFLU_RS17845	0.40	-0.2
4,053,295	+		PFLU_RS17845	0.41	-0.9
4,053,296	-		PFLU_RS17845	0.41	+1.1
4,053,296	-		PFLU_RS17845	0.41	-0.0
4,053,296	-		PFLU_RS17845	0.41	-0.7
4,053,296	-		PFLU_RS17845	0.41	+0.3
4,053,296	-		PFLU_RS17845	0.41	+0.1
4,053,430	+		PFLU_RS17845	0.48	-0.3
4,053,430	+		PFLU_RS17845	0.48	-1.0
4,053,430	+		PFLU_RS17845	0.48	+0.9
4,053,431	-		PFLU_RS17845	0.48	+1.1
4,053,431	-		PFLU_RS17845	0.48	-0.6
4,053,431	-		PFLU_RS17845	0.48	-2.2
4,053,520	+		PFLU_RS17845	0.52	+0.4
4,053,520	+		PFLU_RS17845	0.52	+1.0
4,053,521	-		PFLU_RS17845	0.52	-0.5
4,053,527	-		PFLU_RS17845	0.52	-0.2
4,053,527	-		PFLU_RS17845	0.52	+0.2
4,053,544	+		PFLU_RS17845	0.53	+0.0
4,053,544	+		PFLU_RS17845	0.53	-0.5
4,053,545	-		PFLU_RS17845	0.53	-0.9
4,053,545	-		PFLU_RS17845	0.53	-0.1
4,053,545	-		PFLU_RS17845	0.53	+0.8
4,053,589	+		PFLU_RS17845	0.55	+0.7
4,053,691	+		PFLU_RS17845	0.60	+0.5
4,053,755	+		PFLU_RS17845	0.63	+0.9
4,053,755	+		PFLU_RS17845	0.63	+0.7
4,053,756	-		PFLU_RS17845	0.63	+0.4
4,053,803	+		PFLU_RS17845	0.66	-0.9
4,053,803	+		PFLU_RS17845	0.66	+0.4
4,053,803	+		PFLU_RS17845	0.66	-0.3
4,053,804	-		PFLU_RS17845	0.66	-0.0
4,053,804	-		PFLU_RS17845	0.66	-0.3
4,053,805	+		PFLU_RS17845	0.66	+1.1
4,053,805	+		PFLU_RS17845	0.66	-0.5
4,053,805	+		PFLU_RS17845	0.66	+1.1
4,053,806	-		PFLU_RS17845	0.66	+1.1
4,053,806	-		PFLU_RS17845	0.66	+0.1
4,053,813	-		PFLU_RS17845	0.66	+0.6
4,053,868	+		PFLU_RS17845	0.69	+0.0
4,053,961	+		PFLU_RS17845	0.73	+0.8
4,053,961	+		PFLU_RS17845	0.73	-0.9
4,053,961	+		PFLU_RS17845	0.73	-0.7
4,053,962	-		PFLU_RS17845	0.73	+0.2
4,054,064	-		PFLU_RS17845	0.78	+0.7
4,054,064	-		PFLU_RS17845	0.78	+0.3
4,054,123	+		PFLU_RS17845	0.81	-0.3
4,054,123	+		PFLU_RS17845	0.81	-0.0
4,054,201	+		PFLU_RS17845	0.85	+1.8
4,054,238	-		PFLU_RS17845	0.87	-0.2
4,054,238	-		PFLU_RS17845	0.87	-0.4
4,054,270	+		PFLU_RS17845	0.88	-0.8
4,054,271	-		PFLU_RS17845	0.88	-0.4
4,054,295	-		PFLU_RS17845	0.89	-0.4
4,054,342	+				+0.7
4,054,351	+				-1.4
4,054,351	+				-0.4
4,054,352	-				+0.5
4,054,352	-				-0.3
4,054,505	+				+2.4
4,054,505	+				+0.7
4,054,505	+				+0.3
4,054,505	+				+0.6
4,054,505	+				-0.9
4,054,505	+				+0.6
4,054,505	+				-1.4
4,054,505	+				-0.8
4,054,506	-				-1.4
4,054,506	-				-0.2
4,054,506	-				-0.4
4,054,506	-				-0.7
4,054,506	-				-0.2
4,054,506	-				+1.7
4,054,506	-				+0.7
4,054,506	-				-0.2
4,054,509	+				+0.5
4,054,509	+				+0.1
4,054,509	+				-0.4
4,054,509	+				-0.4
4,054,509	+				-0.4
4,054,510	-				-0.4
4,054,717	-		PFLU_RS17850	0.26	-0.9
4,054,758	+		PFLU_RS17850	0.32	-0.7
4,054,867	+		PFLU_RS17850	0.46	-1.2
4,054,867	+		PFLU_RS17850	0.46	+0.4
4,054,916	+		PFLU_RS17850	0.52	-1.3
4,054,917	-		PFLU_RS17850	0.52	-0.6
4,055,112	+		PFLU_RS17850	0.78	+0.8
4,055,113	-		PFLU_RS17850	0.78	-1.5
4,055,249	+				+0.4
4,055,249	+				+0.6
4,055,249	+				-1.4
4,055,249	+				+1.1
4,055,250	-				+0.4
4,055,250	-				+0.4
4,055,250	-				-0.2
4,055,250	-				+0.0
4,055,250	-				-1.3
4,055,250	-				-0.4
4,055,250	-				-1.3
4,055,250	-				+0.1
4,055,390	+		PFLU_RS17855	0.17	-0.6
4,055,450	+		PFLU_RS17855	0.26	+0.1
4,055,511	+		PFLU_RS17855	0.36	+0.4
4,055,512	-		PFLU_RS17855	0.36	-1.4
4,055,512	-		PFLU_RS17855	0.36	+1.1
4,055,512	-		PFLU_RS17855	0.36	+0.6
4,055,512	-		PFLU_RS17855	0.36	+2.7