Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29760

Experiment: p-Coumaric (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with TAPS
6,611,919	+				+0.9
6,611,920	-				-1.4
6,612,018	+				+1.2
6,612,018	+				+0.9
6,612,018	+				-0.7
6,612,018	+				+0.3
6,612,018	+				-1.1
6,612,018	+				-1.3
6,612,018	+				+0.6
6,612,018	+				-1.5
6,612,018	+				-1.8
6,612,018	+				+0.5
6,612,018	+				+2.5
6,612,018	+				-1.9
6,612,018	+				-1.4
6,612,018	+				-0.8
6,612,019	-				-2.0
6,612,019	-				+0.3
6,612,019	-				-2.7
6,612,019	-				-0.9
6,612,019	-				+1.9
6,612,019	-				-2.2
6,612,019	-				-2.2
6,612,019	-				+0.9
6,612,019	-				-0.1
6,612,019	-				-0.1
6,612,093	+		PFLU_RS29755	0.12	-1.1
6,612,093	+		PFLU_RS29755	0.12	-1.5
6,612,093	+		PFLU_RS29755	0.12	+0.3
6,612,093	+		PFLU_RS29755	0.12	-0.1
6,612,093	+		PFLU_RS29755	0.12	-2.8
6,612,093	+		PFLU_RS29755	0.12	-1.1
6,612,093	+		PFLU_RS29755	0.12	-2.4
6,612,093	+		PFLU_RS29755	0.12	-0.1
6,612,093	+		PFLU_RS29755	0.12	+0.3
6,612,093	+		PFLU_RS29755	0.12	+0.9
6,612,093	+		PFLU_RS29755	0.12	+0.4
6,612,093	+		PFLU_RS29755	0.12	-2.3
6,612,093	+		PFLU_RS29755	0.12	-2.3
6,612,093	+		PFLU_RS29755	0.12	-1.9
6,612,093	+		PFLU_RS29755	0.12	+1.3
6,612,093	+		PFLU_RS29755	0.12	-1.7
6,612,093	+		PFLU_RS29755	0.12	-1.8
6,612,093	+		PFLU_RS29755	0.12	+0.4
6,612,093	+		PFLU_RS29755	0.12	-1.8
6,612,093	+		PFLU_RS29755	0.12	+1.1
6,612,093	+		PFLU_RS29755	0.12	+1.0
6,612,093	+		PFLU_RS29755	0.12	-0.1
6,612,093	+		PFLU_RS29755	0.12	+1.3
6,612,093	+		PFLU_RS29755	0.12	-0.9
6,612,093	+		PFLU_RS29755	0.12	-3.0
6,612,093	+		PFLU_RS29755	0.12	-0.7
6,612,093	+		PFLU_RS29755	0.12	-1.5
6,612,093	+		PFLU_RS29755	0.12	-1.8
6,612,093	+		PFLU_RS29755	0.12	-0.2
6,612,093	+		PFLU_RS29755	0.12	-0.9
6,612,093	+		PFLU_RS29755	0.12	-2.2
6,612,093	+		PFLU_RS29755	0.12	+0.9
6,612,094	-		PFLU_RS29755	0.12	-1.5
6,612,094	-		PFLU_RS29755	0.12	-0.4
6,612,094	-		PFLU_RS29755	0.12	-0.8
6,612,094	-		PFLU_RS29755	0.12	-1.5
6,612,094	-		PFLU_RS29755	0.12	-1.5
6,612,094	-		PFLU_RS29755	0.12	+1.9
6,612,094	-		PFLU_RS29755	0.12	-0.4
6,612,094	-		PFLU_RS29755	0.12	-0.1
6,612,094	-		PFLU_RS29755	0.12	-1.5
6,612,094	-		PFLU_RS29755	0.12	-1.1
6,612,094	-		PFLU_RS29755	0.12	-0.3
6,612,094	-		PFLU_RS29755	0.12	+0.3
6,612,094	-		PFLU_RS29755	0.12	-2.0
6,612,094	-		PFLU_RS29755	0.12	-0.7
6,612,094	-		PFLU_RS29755	0.12	-2.9
6,612,094	-		PFLU_RS29755	0.12	-1.3
6,612,094	-		PFLU_RS29755	0.12	+0.2
6,612,094	-		PFLU_RS29755	0.12	-2.3
6,612,094	-		PFLU_RS29755	0.12	+1.2
6,612,094	-		PFLU_RS29755	0.12	-0.1
6,612,094	-		PFLU_RS29755	0.12	-0.8
6,612,094	-		PFLU_RS29755	0.12	-0.8
6,612,094	-		PFLU_RS29755	0.12	-0.1
6,612,094	-		PFLU_RS29755	0.12	-0.7
6,612,094	-		PFLU_RS29755	0.12	-2.0
6,612,094	-		PFLU_RS29755	0.12	-1.7
6,612,094	-		PFLU_RS29755	0.12	+1.5
6,612,094	-		PFLU_RS29755	0.12	-0.9
6,612,094	-		PFLU_RS29755	0.12	-1.9
6,612,180	+		PFLU_RS29755	0.22	+0.9
6,612,180	+		PFLU_RS29755	0.22	-1.4
6,612,180	+		PFLU_RS29755	0.22	-0.7
6,612,180	+		PFLU_RS29755	0.22	-0.8
6,612,180	+		PFLU_RS29755	0.22	-1.2
6,612,180	+		PFLU_RS29755	0.22	-1.2
6,612,181	-		PFLU_RS29755	0.22	-1.9
6,612,181	-		PFLU_RS29755	0.22	-1.5
6,612,181	-		PFLU_RS29755	0.22	-1.3
6,612,181	-		PFLU_RS29755	0.22	-0.6
6,612,181	-		PFLU_RS29755	0.22	-0.9
6,612,271	+		PFLU_RS29755	0.33	-0.6
6,612,432	+		PFLU_RS29755	0.52	-0.7
6,612,432	+		PFLU_RS29755	0.52	-0.1
6,612,432	+		PFLU_RS29755	0.52	+1.9
6,612,432	+		PFLU_RS29755	0.52	-1.3
6,612,432	+		PFLU_RS29755	0.52	-2.1
6,612,432	+		PFLU_RS29755	0.52	-2.3
6,612,432	+		PFLU_RS29755	0.52	-0.1
6,612,432	+		PFLU_RS29755	0.52	-0.9
6,612,433	-		PFLU_RS29755	0.52	-2.2
6,612,433	-		PFLU_RS29755	0.52	-0.2
6,612,433	-		PFLU_RS29755	0.52	-1.1
6,612,433	-		PFLU_RS29755	0.52	-2.2
6,612,447	+		PFLU_RS29755	0.54	-1.1
6,612,448	-		PFLU_RS29755	0.54	-0.4
6,612,448	-		PFLU_RS29755	0.54	-1.5
6,612,448	-		PFLU_RS29755	0.54	-1.5
6,612,448	-		PFLU_RS29755	0.54	-0.8
6,612,531	+		PFLU_RS29755	0.64	-1.7
6,612,531	+		PFLU_RS29755	0.64	-0.2
6,612,531	+		PFLU_RS29755	0.64	+0.1
6,612,532	-		PFLU_RS29755	0.64	-3.1
6,612,547	-		PFLU_RS29755	0.66	-0.9
6,612,711	+		PFLU_RS29755	0.86	-0.7
6,612,711	+		PFLU_RS29755	0.86	+0.8
6,612,711	+		PFLU_RS29755	0.86	-0.1
6,612,712	-		PFLU_RS29755	0.86	-0.4
6,612,712	-		PFLU_RS29755	0.86	-0.4
6,612,712	-		PFLU_RS29755	0.86	+0.1
6,612,712	-		PFLU_RS29755	0.86	+2.9
6,612,712	-		PFLU_RS29755	0.86	-1.1
6,612,712	-		PFLU_RS29755	0.86	-1.0
6,612,712	-		PFLU_RS29755	0.86	-2.0
6,612,714	+		PFLU_RS29755	0.86	-0.8
6,612,714	+		PFLU_RS29755	0.86	-1.5
6,612,714	+		PFLU_RS29755	0.86	-0.8
6,612,714	+		PFLU_RS29755	0.86	-0.1
6,612,715	-		PFLU_RS29755	0.86	-0.3
6,612,715	-		PFLU_RS29755	0.86	-1.1
6,612,715	-		PFLU_RS29755	0.86	-1.9
6,612,899	+				+0.5
6,612,899	+				-1.1
6,612,899	+				+0.4
6,612,899	+				+0.3
6,612,899	+				+0.2
6,612,899	+				+0.3
6,612,899	+				+0.3
6,612,899	+				-2.8
6,612,899	+				-0.0
6,612,900	-				+0.1
6,612,900	-				+0.7
6,612,900	-				-1.1
6,612,900	-				+0.2
6,612,900	-				+0.7
6,612,900	-				+0.5
6,612,908	-				-0.4
6,612,918	-				-0.0
6,613,002	-				-1.1
6,613,002	-				-0.9
6,613,052	+				-0.3
6,613,052	+				-0.5
6,613,052	+				+0.9
6,613,052	+				+1.2
6,613,053	-				-1.5
6,613,053	-				-0.4
6,613,053	-				-2.1
6,613,056	+				-2.7
6,613,056	+				-0.1
6,613,056	+				+0.1
6,613,056	+				-0.2
6,613,056	+				-0.2
6,613,056	+				+2.5
6,613,056	+				-0.8
6,613,056	+				-0.0
6,613,057	-				-0.1
6,613,057	-				+0.2
6,613,057	-				+1.5
6,613,057	-				-0.9
6,613,057	-				-1.1
6,613,057	-				-1.1
6,613,057	-				-0.8
6,613,057	-				-0.3
6,613,057	-				-2.4
6,613,057	-				-0.4
6,613,057	-				-2.3
6,613,057	-				-0.2
6,613,057	-				-0.4
6,613,097	+		PFLU_RS29760	0.12	-0.7
6,613,098	-		PFLU_RS29760	0.12	-1.5
6,613,103	+		PFLU_RS29760	0.12	-0.8
6,613,103	+		PFLU_RS29760	0.12	+4.2
6,613,103	+		PFLU_RS29760	0.12	-1.3
6,613,103	+		PFLU_RS29760	0.12	-0.2
6,613,103	+		PFLU_RS29760	0.12	-1.9
6,613,103	+		PFLU_RS29760	0.12	-2.4
6,613,103	+		PFLU_RS29760	0.12	-1.7
6,613,104	-		PFLU_RS29760	0.12	-0.7
6,613,107	+		PFLU_RS29760	0.13	-2.4
6,613,107	+		PFLU_RS29760	0.13	+0.5
6,613,453	+		PFLU_RS29760	0.33	+0.2
6,613,453	+		PFLU_RS29760	0.33	-0.9
6,613,453	+		PFLU_RS29760	0.33	-1.7
6,613,453	+		PFLU_RS29760	0.33	-0.4
6,613,453	+		PFLU_RS29760	0.33	-2.7
6,613,453	+		PFLU_RS29760	0.33	-0.9
6,613,453	+		PFLU_RS29760	0.33	-2.9
6,613,453	+		PFLU_RS29760	0.33	-1.1
6,613,453	+		PFLU_RS29760	0.33	-2.0
6,613,453	+		PFLU_RS29760	0.33	-2.1
6,613,453	+		PFLU_RS29760	0.33	-1.8
6,613,454	-		PFLU_RS29760	0.33	-1.0
6,613,454	-		PFLU_RS29760	0.33	-1.1
6,613,454	-		PFLU_RS29760	0.33	-2.3
6,613,454	-		PFLU_RS29760	0.33	-2.9
6,613,454	-		PFLU_RS29760	0.33	-0.1
6,613,454	-		PFLU_RS29760	0.33	+0.9
6,613,454	-		PFLU_RS29760	0.33	-2.0
6,613,457	+		PFLU_RS29760	0.33	-1.5
6,613,457	+		PFLU_RS29760	0.33	-0.8
6,613,457	+		PFLU_RS29760	0.33	-0.8
6,613,457	+		PFLU_RS29760	0.33	-1.5
6,613,457	+		PFLU_RS29760	0.33	-0.1
6,613,457	+		PFLU_RS29760	0.33	-1.4
6,613,457	+		PFLU_RS29760	0.33	-0.7
6,613,457	+		PFLU_RS29760	0.33	-1.8
6,613,457	+		PFLU_RS29760	0.33	-1.2
6,613,457	+		PFLU_RS29760	0.33	-1.6
6,613,457	+		PFLU_RS29760	0.33	-0.7
6,613,457	+		PFLU_RS29760	0.33	-2.3
6,613,457	+		PFLU_RS29760	0.33	-1.9
6,613,457	+		PFLU_RS29760	0.33	+0.3
6,613,457	+		PFLU_RS29760	0.33	-0.9
6,613,457	+		PFLU_RS29760	0.33	-1.4
6,613,457	+		PFLU_RS29760	0.33	-0.7
6,613,457	+		PFLU_RS29760	0.33	-0.7
6,613,457	+		PFLU_RS29760	0.33	-1.5
6,613,457	+		PFLU_RS29760	0.33	-1.4
6,613,457	+		PFLU_RS29760	0.33	+1.9
6,613,457	+		PFLU_RS29760	0.33	-0.9
6,613,458	-		PFLU_RS29760	0.34	-0.9
6,613,458	-		PFLU_RS29760	0.34	-0.9
6,613,458	-		PFLU_RS29760	0.34	-1.6
6,613,458	-		PFLU_RS29760	0.34	-0.4
6,613,458	-		PFLU_RS29760	0.34	-0.9
6,613,458	-		PFLU_RS29760	0.34	-1.9
6,613,458	-		PFLU_RS29760	0.34	-1.9
6,613,458	-		PFLU_RS29760	0.34	-2.6
6,613,458	-		PFLU_RS29760	0.34	-2.0
6,613,458	-		PFLU_RS29760	0.34	-1.3
6,613,458	-		PFLU_RS29760	0.34	-2.5
6,613,458	-		PFLU_RS29760	0.34	-0.9
6,613,458	-		PFLU_RS29760	0.34	-0.1
6,613,458	-		PFLU_RS29760	0.34	+0.7
6,613,487	+		PFLU_RS29760	0.35	+0.9
6,613,487	+		PFLU_RS29760	0.35	-1.5
6,613,488	-		PFLU_RS29760	0.35	-2.4
6,613,562	+		PFLU_RS29760	0.40	-0.3
6,613,563	-		PFLU_RS29760	0.40	-0.6
6,613,563	-		PFLU_RS29760	0.40	-0.9
6,613,574	+		PFLU_RS29760	0.40	-0.3
6,613,575	-		PFLU_RS29760	0.41	-0.9
6,613,575	-		PFLU_RS29760	0.41	-2.3
6,613,721	+		PFLU_RS29760	0.49	-0.5
6,613,721	+		PFLU_RS29760	0.49	-1.5
6,613,721	+		PFLU_RS29760	0.49	+0.0
6,613,721	+		PFLU_RS29760	0.49	-0.7
6,613,722	-		PFLU_RS29760	0.49	-0.7
6,613,722	-		PFLU_RS29760	0.49	-1.8
6,613,722	-		PFLU_RS29760	0.49	-1.8
6,613,722	-		PFLU_RS29760	0.49	-1.3
6,613,722	-		PFLU_RS29760	0.49	-2.4
6,613,722	-		PFLU_RS29760	0.49	-1.5
6,613,756	-		PFLU_RS29760	0.51	-2.3
6,613,763	+		PFLU_RS29760	0.52	-2.1
6,613,764	-		PFLU_RS29760	0.52	-0.8
6,613,883	+		PFLU_RS29760	0.59	-0.7
6,613,884	-		PFLU_RS29760	0.59	-2.3
6,613,980	+		PFLU_RS29760	0.65	-1.3
6,614,376	+		PFLU_RS29760	0.88	-0.8
6,614,376	+		PFLU_RS29760	0.88	-1.5
6,614,376	+		PFLU_RS29760	0.88	-2.5
6,614,396	-		PFLU_RS29760	0.90	-1.8
6,614,402	+				+1.8
6,614,402	+				+0.6
6,614,402	+				-1.6
6,614,402	+				-2.2
6,614,402	+				-2.0
6,614,402	+				+0.2
6,614,402	+				+0.2
6,614,402	+				-1.5
6,614,402	+				-1.9
6,614,402	+				-0.1
6,614,402	+				-0.9
6,614,402	+				-1.2
6,614,402	+				-0.9
6,614,402	+				-1.9
6,614,402	+				+0.3
6,614,402	+				+0.3
6,614,402	+				+0.1
6,614,402	+				-3.7
6,614,402	+				-1.3
6,614,402	+				+0.3
6,614,402	+				-1.3
6,614,403	-				-2.4
6,614,403	-				-0.4
6,614,403	-				-1.8
6,614,403	-				-1.5
6,614,403	-				-0.9
6,614,403	-				+0.3
6,614,403	-				-1.8
6,614,403	-				+0.3
6,614,403	-				-1.8
6,614,403	-				-0.9
6,614,403	-				+0.3
6,614,403	-				-0.9
6,614,403	-				-0.9
6,614,403	-				+0.1
6,614,403	-				-1.9
6,614,403	-				-1.1
6,614,403	-				-1.4
6,614,403	-				-1.2
6,614,449	+				-2.8
6,614,449	+				+0.1
6,614,449	+				+0.3
6,614,450	-				-2.1
6,614,450	-				-1.4
6,614,576	+				-2.1
6,614,576	+				-0.6
6,614,576	+				+0.3
6,614,576	+				+0.3
6,614,576	+				-2.6
6,614,577	-				-0.8
6,614,577	-				+3.5
6,614,577	-				-1.9
6,614,577	-				-3.0
6,614,577	-				+2.9
6,614,586	-				+0.3
6,614,597	+				+0.1
6,614,597	+				+0.9
6,614,598	-				-3.3
6,614,598	-				-0.1
6,614,598	-				+0.8
6,614,598	-				+0.3
6,614,598	-				+1.1
6,614,693	+				-0.8
6,614,987	+		PFLU_RS29765	0.18	+0.6
6,614,987	+		PFLU_RS29765	0.18	-0.6
6,614,987	+		PFLU_RS29765	0.18	-1.5
6,614,987	+		PFLU_RS29765	0.18	-0.0
6,614,987	+		PFLU_RS29765	0.18	-2.0
6,614,987	+		PFLU_RS29765	0.18	-1.2
6,614,987	+		PFLU_RS29765	0.18	-1.7
6,614,987	+		PFLU_RS29765	0.18	-1.5
6,614,987	+		PFLU_RS29765	0.18	-0.2
6,614,987	+		PFLU_RS29765	0.18	-1.1
6,614,987	+		PFLU_RS29765	0.18	-2.1
6,614,987	+		PFLU_RS29765	0.18	+0.1
6,614,987	+		PFLU_RS29765	0.18	-0.3
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