Experiment: Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26685 and BWI76_RS26690 are separated by 51 nucleotides BWI76_RS26690 and BWI76_RS26695 are separated by 121 nucleotides
BWI76_RS26685: BWI76_RS26685 - glutathione-disulfide reductase, at 5,525,414 to 5,526,766
_RS26685
BWI76_RS26690: BWI76_RS26690 - glutathione S-transferase, at 5,526,818 to 5,527,441
_RS26690
BWI76_RS26695: BWI76_RS26695 - iron-containing alcohol dehydrogenase, at 5,527,563 to 5,528,711
_RS26695
Position (kb) 5526
5527
5528 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5525.845 kb on - strand, within BWI76_RS26685 at 5525.882 kb on - strand, within BWI76_RS26685 at 5526.091 kb on - strand, within BWI76_RS26685 at 5526.159 kb on + strand, within BWI76_RS26685 at 5526.170 kb on + strand, within BWI76_RS26685 at 5526.178 kb on - strand, within BWI76_RS26685 at 5526.440 kb on + strand, within BWI76_RS26685 at 5526.473 kb on - strand, within BWI76_RS26685 at 5526.603 kb on + strand, within BWI76_RS26685 at 5526.756 kb on - strand at 5526.879 kb on - strand at 5526.881 kb on - strand, within BWI76_RS26690 at 5526.954 kb on + strand, within BWI76_RS26690 at 5526.954 kb on + strand, within BWI76_RS26690 at 5526.993 kb on - strand, within BWI76_RS26690 at 5527.052 kb on + strand, within BWI76_RS26690 at 5527.110 kb on + strand, within BWI76_RS26690 at 5527.110 kb on - strand, within BWI76_RS26690 at 5527.297 kb on + strand, within BWI76_RS26690 at 5527.305 kb on - strand, within BWI76_RS26690 at 5527.330 kb on + strand, within BWI76_RS26690 at 5527.351 kb on - strand, within BWI76_RS26690 at 5527.395 kb on + strand at 5527.519 kb on + strand at 5527.581 kb on - strand at 5527.753 kb on - strand, within BWI76_RS26695 at 5527.868 kb on - strand, within BWI76_RS26695 at 5527.987 kb on - strand, within BWI76_RS26695 at 5528.192 kb on - strand, within BWI76_RS26695 at 5528.238 kb on - strand, within BWI76_RS26695 at 5528.289 kb on + strand, within BWI76_RS26695 at 5528.311 kb on - strand, within BWI76_RS26695 at 5528.316 kb on + strand, within BWI76_RS26695 at 5528.316 kb on + strand, within BWI76_RS26695 at 5528.375 kb on + strand, within BWI76_RS26695
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM remove 5,525,845 - BWI76_RS26685 0.32 -3.1 5,525,882 - BWI76_RS26685 0.35 -0.0 5,526,091 - BWI76_RS26685 0.50 -2.1 5,526,159 + BWI76_RS26685 0.55 -3.3 5,526,170 + BWI76_RS26685 0.56 +0.4 5,526,178 - BWI76_RS26685 0.56 -1.0 5,526,440 + BWI76_RS26685 0.76 -1.4 5,526,473 - BWI76_RS26685 0.78 -0.6 5,526,603 + BWI76_RS26685 0.88 -3.2 5,526,756 - -0.6 5,526,879 - -0.3 5,526,881 - BWI76_RS26690 0.10 +0.8 5,526,954 + BWI76_RS26690 0.22 +0.5 5,526,954 + BWI76_RS26690 0.22 +0.7 5,526,993 - BWI76_RS26690 0.28 +1.1 5,527,052 + BWI76_RS26690 0.38 -0.4 5,527,110 + BWI76_RS26690 0.47 +1.5 5,527,110 - BWI76_RS26690 0.47 +0.6 5,527,297 + BWI76_RS26690 0.77 +1.0 5,527,305 - BWI76_RS26690 0.78 +0.2 5,527,330 + BWI76_RS26690 0.82 -1.6 5,527,351 - BWI76_RS26690 0.85 +0.6 5,527,395 + +1.7 5,527,519 + +0.2 5,527,581 - +0.1 5,527,753 - BWI76_RS26695 0.17 -3.3 5,527,868 - BWI76_RS26695 0.27 -0.2 5,527,987 - BWI76_RS26695 0.37 +0.1 5,528,192 - BWI76_RS26695 0.55 +1.0 5,528,238 - BWI76_RS26695 0.59 -1.6 5,528,289 + BWI76_RS26695 0.63 +0.1 5,528,311 - BWI76_RS26695 0.65 +0.4 5,528,316 + BWI76_RS26695 0.66 -1.0 5,528,316 + BWI76_RS26695 0.66 -0.6 5,528,375 + BWI76_RS26695 0.71 +0.2
Or see this region's nucleotide sequence