Experiment: Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24780 and BWI76_RS24785 are separated by 126 nucleotides BWI76_RS24785 and BWI76_RS24790 are separated by 37 nucleotides
BWI76_RS24780: BWI76_RS24780 - glutathione-dependent reductase, at 5,165,351 to 5,166,337
_RS24780
BWI76_RS24785: BWI76_RS24785 - DUF805 domain-containing protein, at 5,166,464 to 5,166,832
_RS24785
BWI76_RS24790: BWI76_RS24790 - LysR family transcriptional regulator, at 5,166,870 to 5,167,766
_RS24790
Position (kb) 5166
5167 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5165.493 kb on - strand, within BWI76_RS24780 at 5165.516 kb on + strand, within BWI76_RS24780 at 5165.538 kb on + strand, within BWI76_RS24780 at 5165.564 kb on - strand, within BWI76_RS24780 at 5165.571 kb on + strand, within BWI76_RS24780 at 5165.914 kb on - strand, within BWI76_RS24780 at 5165.925 kb on - strand, within BWI76_RS24780 at 5165.952 kb on + strand, within BWI76_RS24780 at 5166.053 kb on - strand, within BWI76_RS24780 at 5166.083 kb on + strand, within BWI76_RS24780 at 5166.084 kb on - strand, within BWI76_RS24780 at 5166.086 kb on - strand, within BWI76_RS24780 at 5166.188 kb on - strand, within BWI76_RS24780 at 5166.246 kb on + strand at 5166.326 kb on + strand at 5166.326 kb on + strand at 5166.461 kb on + strand at 5166.469 kb on - strand at 5166.552 kb on + strand, within BWI76_RS24785 at 5166.644 kb on - strand, within BWI76_RS24785 at 5166.674 kb on - strand, within BWI76_RS24785 at 5166.700 kb on + strand, within BWI76_RS24785 at 5166.707 kb on + strand, within BWI76_RS24785 at 5166.831 kb on + strand at 5166.921 kb on - strand at 5166.923 kb on + strand at 5166.923 kb on + strand at 5166.925 kb on + strand at 5166.977 kb on - strand, within BWI76_RS24790 at 5166.977 kb on - strand, within BWI76_RS24790 at 5166.982 kb on - strand, within BWI76_RS24790 at 5167.007 kb on - strand, within BWI76_RS24790 at 5167.014 kb on - strand, within BWI76_RS24790 at 5167.055 kb on - strand, within BWI76_RS24790 at 5167.096 kb on - strand, within BWI76_RS24790 at 5167.340 kb on + strand, within BWI76_RS24790 at 5167.340 kb on + strand at 5167.343 kb on - strand, within BWI76_RS24790 at 5167.348 kb on - strand, within BWI76_RS24790 at 5167.360 kb on - strand, within BWI76_RS24790 at 5167.441 kb on - strand, within BWI76_RS24790 at 5167.549 kb on + strand, within BWI76_RS24790 at 5167.653 kb on - strand, within BWI76_RS24790 at 5167.653 kb on - strand, within BWI76_RS24790 at 5167.653 kb on - strand, within BWI76_RS24790 at 5167.653 kb on - strand, within BWI76_RS24790
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM remove 5,165,493 - BWI76_RS24780 0.14 +0.0 5,165,516 + BWI76_RS24780 0.17 +0.4 5,165,538 + BWI76_RS24780 0.19 +0.8 5,165,564 - BWI76_RS24780 0.22 +2.0 5,165,571 + BWI76_RS24780 0.22 -1.1 5,165,914 - BWI76_RS24780 0.57 -0.6 5,165,925 - BWI76_RS24780 0.58 -0.0 5,165,952 + BWI76_RS24780 0.61 -0.4 5,166,053 - BWI76_RS24780 0.71 +0.2 5,166,083 + BWI76_RS24780 0.74 -1.5 5,166,084 - BWI76_RS24780 0.74 +0.2 5,166,086 - BWI76_RS24780 0.74 +0.0 5,166,188 - BWI76_RS24780 0.85 +1.5 5,166,246 + +0.9 5,166,326 + -0.5 5,166,326 + +0.9 5,166,461 + -0.1 5,166,469 - +0.0 5,166,552 + BWI76_RS24785 0.24 +0.4 5,166,644 - BWI76_RS24785 0.49 +0.8 5,166,674 - BWI76_RS24785 0.57 +0.2 5,166,700 + BWI76_RS24785 0.64 +1.6 5,166,707 + BWI76_RS24785 0.66 -2.5 5,166,831 + -1.2 5,166,921 - +0.5 5,166,923 + -0.6 5,166,923 + -0.1 5,166,925 + -0.5 5,166,977 - BWI76_RS24790 0.12 -0.5 5,166,977 - BWI76_RS24790 0.12 +1.1 5,166,982 - BWI76_RS24790 0.12 +0.0 5,167,007 - BWI76_RS24790 0.15 +0.7 5,167,014 - BWI76_RS24790 0.16 -1.4 5,167,055 - BWI76_RS24790 0.21 -2.9 5,167,096 - BWI76_RS24790 0.25 -0.5 5,167,340 + BWI76_RS24790 0.52 -0.3 5,167,340 + +1.4 5,167,343 - BWI76_RS24790 0.53 +0.6 5,167,348 - BWI76_RS24790 0.53 +0.6 5,167,360 - BWI76_RS24790 0.55 +0.7 5,167,441 - BWI76_RS24790 0.64 +0.2 5,167,549 + BWI76_RS24790 0.76 +0.4 5,167,653 - BWI76_RS24790 0.87 +0.5 5,167,653 - BWI76_RS24790 0.87 +1.6 5,167,653 - BWI76_RS24790 0.87 -0.5 5,167,653 - BWI76_RS24790 0.87 +1.1
Or see this region's nucleotide sequence