Experiment: Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23145 and BWI76_RS23150 overlap by 1 nucleotides BWI76_RS23150 and BWI76_RS23155 overlap by 4 nucleotides BWI76_RS23155 and BWI76_RS23160 are separated by 3 nucleotides BWI76_RS23160 and BWI76_RS23165 are separated by 9 nucleotides
BWI76_RS23145: BWI76_RS23145 - propanediol utilization protein, at 4,824,089 to 4,824,550
_RS23145
BWI76_RS23150: BWI76_RS23150 - propanediol utilization phosphotransacylase, at 4,824,550 to 4,825,182
_RS23150
BWI76_RS23155: BWI76_RS23155 - microcompartment protein PduM, at 4,825,179 to 4,825,670
_RS23155
BWI76_RS23160: BWI76_RS23160 - ethanolamine utilization protein EutN, at 4,825,674 to 4,825,949
_RS23160
BWI76_RS23165: BWI76_RS23165 - ATP:cob(I)alamin adenosyltransferase, at 4,825,959 to 4,826,969
_RS23165
Position (kb) 4825
4826 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4824.675 kb on - strand, within BWI76_RS23150 at 4824.841 kb on + strand, within BWI76_RS23150 at 4824.879 kb on + strand, within BWI76_RS23150 at 4825.221 kb on - strand at 4825.274 kb on + strand, within BWI76_RS23155 at 4825.417 kb on - strand, within BWI76_RS23155 at 4825.496 kb on - strand, within BWI76_RS23155 at 4825.572 kb on + strand, within BWI76_RS23155 at 4825.612 kb on + strand, within BWI76_RS23155 at 4825.973 kb on - strand at 4826.213 kb on + strand, within BWI76_RS23165 at 4826.266 kb on + strand, within BWI76_RS23165 at 4826.442 kb on + strand, within BWI76_RS23165 at 4826.457 kb on + strand, within BWI76_RS23165 at 4826.550 kb on + strand, within BWI76_RS23165 at 4826.580 kb on - strand, within BWI76_RS23165
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM remove 4,824,675 - BWI76_RS23150 0.20 +0.4 4,824,841 + BWI76_RS23150 0.46 +0.1 4,824,879 + BWI76_RS23150 0.52 -1.0 4,825,221 - +0.9 4,825,274 + BWI76_RS23155 0.19 -0.2 4,825,417 - BWI76_RS23155 0.48 -1.5 4,825,496 - BWI76_RS23155 0.64 -0.9 4,825,572 + BWI76_RS23155 0.80 +0.1 4,825,612 + BWI76_RS23155 0.88 -1.2 4,825,973 - -0.6 4,826,213 + BWI76_RS23165 0.25 -1.9 4,826,266 + BWI76_RS23165 0.30 -0.1 4,826,442 + BWI76_RS23165 0.48 +1.6 4,826,457 + BWI76_RS23165 0.49 +0.5 4,826,550 + BWI76_RS23165 0.58 +3.5 4,826,580 - BWI76_RS23165 0.61 +0.9
Or see this region's nucleotide sequence