Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13365

Experiment: Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13360 and BWI76_RS13365 are separated by 192 nucleotidesBWI76_RS13365 and BWI76_RS13370 are separated by 94 nucleotidesBWI76_RS13370 and BWI76_RS13375 are separated by 248 nucleotides BWI76_RS13360: BWI76_RS13360 - benzoate transporter, at 2,786,424 to 2,787,590 _RS13360 BWI76_RS13365: BWI76_RS13365 - GCN5-like N-acetyltransferase, at 2,787,783 to 2,788,208 _RS13365 BWI76_RS13370: BWI76_RS13370 - hypothetical protein, at 2,788,303 to 2,788,839 _RS13370 BWI76_RS13375: BWI76_RS13375 - protease, at 2,789,088 to 2,791,052 _RS13375 Position (kb) 2787 2788 2789Strain fitness (log2 ratio) -3 -2 -1 0 1at 2787.286 kb on - strand, within BWI76_RS13360at 2787.391 kb on - strand, within BWI76_RS13360at 2787.440 kb on - strand, within BWI76_RS13360at 2787.445 kb on - strand, within BWI76_RS13360at 2787.583 kb on - strandat 2787.791 kb on + strandat 2788.548 kb on + strand, within BWI76_RS13370at 2788.548 kb on + strand, within BWI76_RS13370at 2788.621 kb on - strand, within BWI76_RS13370at 2788.680 kb on + strand, within BWI76_RS13370at 2788.789 kb on - strandat 2788.883 kb on + strandat 2788.933 kb on - strandat 2789.034 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
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2,787,286 - BWI76_RS13360 0.74 -0.5
2,787,391 - BWI76_RS13360 0.83 -2.8
2,787,440 - BWI76_RS13360 0.87 +0.2
2,787,445 - BWI76_RS13360 0.87 -3.7
2,787,583 - +1.5
2,787,791 + -1.1
2,788,548 + BWI76_RS13370 0.46 +0.9
2,788,548 + BWI76_RS13370 0.46 -1.1
2,788,621 - BWI76_RS13370 0.59 -2.8
2,788,680 + BWI76_RS13370 0.70 -0.4
2,788,789 - -0.9
2,788,883 + -1.4
2,788,933 - +0.3
2,789,034 - -1.4

Or see this region's nucleotide sequence