Experiment: Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10950 and BWI76_RS10955 overlap by 95 nucleotides BWI76_RS10955 and BWI76_RS10960 overlap by 38 nucleotides BWI76_RS10960 and BWI76_RS10965 are separated by 209 nucleotides
BWI76_RS10950: BWI76_RS10950 - MFS transporter, at 2,312,436 to 2,313,686
_RS10950
BWI76_RS10955: BWI76_RS10955 - hypothetical protein, at 2,313,592 to 2,313,899
_RS10955
BWI76_RS10960: BWI76_RS10960 - lipid A biosynthesis lauroyl acyltransferase, at 2,313,862 to 2,314,782
_RS10960
BWI76_RS10965: BWI76_RS10965 - sulfurtransferase, at 2,314,992 to 2,316,056
_RS10965
Position (kb)
2313
2314
2315 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2313.263 kb on + strand, within BWI76_RS10950 at 2313.339 kb on + strand, within BWI76_RS10950 at 2313.356 kb on + strand, within BWI76_RS10950 at 2313.769 kb on + strand, within BWI76_RS10955 at 2313.844 kb on - strand, within BWI76_RS10955 at 2314.790 kb on - strand at 2314.790 kb on - strand at 2314.790 kb on - strand at 2314.931 kb on - strand at 2314.984 kb on + strand at 2314.992 kb on - strand at 2315.034 kb on - strand at 2315.050 kb on + strand at 2315.050 kb on + strand at 2315.058 kb on - strand at 2315.121 kb on + strand at 2315.138 kb on + strand, within BWI76_RS10965 at 2315.151 kb on + strand, within BWI76_RS10965 at 2315.205 kb on + strand, within BWI76_RS10965 at 2315.306 kb on + strand, within BWI76_RS10965 at 2315.320 kb on + strand, within BWI76_RS10965
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM remove 2,313,263 + BWI76_RS10950 0.66 +1.5 2,313,339 + BWI76_RS10950 0.72 -2.9 2,313,356 + BWI76_RS10950 0.74 -0.8 2,313,769 + BWI76_RS10955 0.57 -0.3 2,313,844 - BWI76_RS10955 0.82 -3.8 2,314,790 - -0.7 2,314,790 - -0.1 2,314,790 - +3.8 2,314,931 - -1.1 2,314,984 + +1.1 2,314,992 - -1.5 2,315,034 - -0.3 2,315,050 + -1.3 2,315,050 + -1.2 2,315,058 - -1.7 2,315,121 + +0.9 2,315,138 + BWI76_RS10965 0.14 -0.3 2,315,151 + BWI76_RS10965 0.15 -1.4 2,315,205 + BWI76_RS10965 0.20 -1.7 2,315,306 + BWI76_RS10965 0.29 -0.4 2,315,320 + BWI76_RS10965 0.31 +0.0
Or see this region's nucleotide sequence