Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001633

Experiment: Abietic Acid 5 mM in soil extract

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Abietic Acid 5 mM in soil extract
1,819,150	+		ABIE53_001632	0.51	+0.8
1,819,152	+		ABIE53_001632	0.51	-0.1
1,819,152	+		ABIE53_001632	0.51	-0.3
1,819,152	+		ABIE53_001632	0.51	-3.0
1,819,152	+		ABIE53_001632	0.51	-0.3
1,819,152	+		ABIE53_001632	0.51	-0.5
1,819,152	+		ABIE53_001632	0.51	+0.9
1,819,152	+		ABIE53_001632	0.51	+2.2
1,819,152	+		ABIE53_001632	0.51	-1.7
1,819,152	+		ABIE53_001632	0.51	-1.1
1,819,152	+		ABIE53_001632	0.51	+0.6
1,819,152	+		ABIE53_001632	0.51	+1.3
1,819,152	+		ABIE53_001632	0.51	-0.2
1,819,152	+		ABIE53_001632	0.51	+0.2
1,819,152	+		ABIE53_001632	0.51	+3.2
1,819,152	+		ABIE53_001632	0.51	+0.2
1,819,152	+		ABIE53_001632	0.51	-0.2
1,819,152	+		ABIE53_001632	0.51	+1.4
1,819,152	+		ABIE53_001632	0.51	+0.9
1,819,152	+		ABIE53_001632	0.51	+0.6
1,819,152	+		ABIE53_001632	0.51	+0.6
1,819,152	+		ABIE53_001632	0.51	+0.6
1,819,152	+		ABIE53_001632	0.51	+0.8
1,819,152	+		ABIE53_001632	0.51	-0.5
1,819,152	+		ABIE53_001632	0.51	-2.3
1,819,153	-		ABIE53_001632	0.51	-0.2
1,819,153	-		ABIE53_001632	0.51	-0.1
1,819,153	-		ABIE53_001632	0.51	-0.5
1,819,153	-		ABIE53_001632	0.51	-0.0
1,819,153	-		ABIE53_001632	0.51	+0.2
1,819,153	-		ABIE53_001632	0.51	-0.3
1,819,153	-		ABIE53_001632	0.51	-1.3
1,819,153	-		ABIE53_001632	0.51	-0.0
1,819,153	-		ABIE53_001632	0.51	-0.4
1,819,153	-		ABIE53_001632	0.51	-0.8
1,819,153	-		ABIE53_001632	0.51	-0.1
1,819,153	-		ABIE53_001632	0.51	+0.8
1,819,153	-		ABIE53_001632	0.51	-0.3
1,819,153	-		ABIE53_001632	0.51	+2.6
1,819,153	-		ABIE53_001632	0.51	-0.6
1,819,153	-		ABIE53_001632	0.51	-0.0
1,819,153	-		ABIE53_001632	0.51	+0.1
1,819,153	-		ABIE53_001632	0.51	+1.5
1,819,153	-		ABIE53_001632	0.51	-0.9
1,819,153	-		ABIE53_001632	0.51	-0.4
1,819,153	-		ABIE53_001632	0.51	+1.2
1,819,153	-		ABIE53_001632	0.51	-0.5
1,819,153	-		ABIE53_001632	0.51	-0.5
1,819,153	-		ABIE53_001632	0.51	-1.5
1,819,227	-		ABIE53_001632	0.55	-1.0
1,819,339	+		ABIE53_001632	0.61	+0.4
1,819,339	+		ABIE53_001632	0.61	-1.3
1,819,501	+		ABIE53_001632	0.70	-0.9
1,819,501	+		ABIE53_001632	0.70	-0.2
1,819,501	+		ABIE53_001632	0.70	-0.1
1,819,502	-		ABIE53_001632	0.70	+0.9
1,819,772	+		ABIE53_001632	0.85	-0.1
1,819,773	-		ABIE53_001632	0.85	+0.3
1,819,773	-		ABIE53_001632	0.85	-0.6
1,819,793	+		ABIE53_001632	0.86	+0.8
1,819,793	+		ABIE53_001632	0.86	+0.3
1,819,793	+		ABIE53_001632	0.86	+0.4
1,819,793	+		ABIE53_001632	0.86	+0.1
1,819,793	+		ABIE53_001632	0.86	-0.8
1,819,793	+		ABIE53_001632	0.86	-0.4
1,819,793	+		ABIE53_001632	0.86	-0.2
1,819,793	+		ABIE53_001632	0.86	+0.7
1,819,794	-		ABIE53_001632	0.86	-0.9
1,819,794	-		ABIE53_001632	0.86	-0.4
1,819,794	-		ABIE53_001632	0.86	-2.5
1,819,812	+		ABIE53_001632	0.87	-0.2
1,819,813	-		ABIE53_001632	0.87	+0.3
1,819,828	-		ABIE53_001632	0.88	-1.2
1,819,828	-		ABIE53_001632	0.88	+1.4
1,819,835	+		ABIE53_001632	0.89	-0.2
1,819,835	+		ABIE53_001632	0.89	+0.5
1,819,867	+				+1.6
1,819,867	+				+0.6
1,819,867	+				-0.4
1,819,948	+				-0.2
1,819,948	+				+0.1
1,819,949	-				+0.4
1,819,951	+				+0.6
1,819,951	+				+1.0
1,819,951	+				-1.4
1,819,951	+				-0.6
1,819,951	+				+0.4
1,819,951	+				+1.8
1,819,951	+				+0.1
1,819,951	+				+2.2
1,819,952	-				-0.5
1,819,952	-				+1.4
1,819,952	-				+1.0
1,819,952	-				-0.9
1,819,952	-				+0.9
1,819,952	-				-3.4
1,819,952	-				-0.9
1,819,952	-				+0.5
1,819,952	-				-0.5
1,819,991	-				+0.0
1,820,001	+				-0.7
1,820,001	+				-0.8
1,820,001	+				-1.2
1,820,001	+				+0.1
1,820,002	-				-0.2
1,820,002	-				+0.9
1,820,017	+				+0.2
1,820,017	+				+0.6
1,820,017	+				-1.8
1,820,017	+				-1.4
1,820,017	+				+0.9
1,820,018	-				-0.9
1,820,031	-				-0.9
1,820,031	-				-0.9
1,820,106	+				-0.1
1,820,106	+				+0.2
1,820,106	+				+0.0
1,820,107	-				+0.6
1,820,196	+				-0.4
1,820,196	+				-1.4
1,820,197	-				+0.5
1,820,197	-				-0.6
1,820,197	-				-0.5
1,820,197	-				+1.8
1,820,198	+				+0.4
1,820,198	+				-0.6
1,820,199	-				+1.3
1,820,199	-				+0.1
1,820,199	-				-0.6
1,820,213	+				-0.6
1,820,261	-				+1.4
1,820,374	+				+2.2
1,820,374	+				-0.7
1,820,374	+				+0.2
1,820,374	+				-0.8
1,820,375	-				+0.6
1,820,375	-				+1.2
1,820,390	-				+1.0
1,820,565	+		ABIE53_001633	0.14	-1.3
1,820,666	+		ABIE53_001633	0.17	+0.1
1,820,667	-		ABIE53_001633	0.17	+0.2
1,820,810	-		ABIE53_001633	0.21	-0.3
1,820,976	+		ABIE53_001633	0.26	-0.3
1,820,976	+		ABIE53_001633	0.26	-0.6
1,820,977	-		ABIE53_001633	0.26	-0.2
1,820,987	+		ABIE53_001633	0.26	-2.0
1,820,988	-		ABIE53_001633	0.26	-0.7
1,820,988	-		ABIE53_001633	0.26	-0.5
1,821,008	+		ABIE53_001633	0.27	+3.2
1,821,008	+		ABIE53_001633	0.27	+1.9
1,821,009	-		ABIE53_001633	0.27	+0.1
1,821,048	+		ABIE53_001633	0.28	-0.4
1,821,048	+		ABIE53_001633	0.28	+0.2
1,821,048	+		ABIE53_001633	0.28	-1.3
1,821,048	+		ABIE53_001633	0.28	+1.4
1,821,048	+		ABIE53_001633	0.28	-0.4
1,821,048	+		ABIE53_001633	0.28	-1.1
1,821,048	+		ABIE53_001633	0.28	+0.2
1,821,048	+		ABIE53_001633	0.28	+2.2
1,821,048	+		ABIE53_001633	0.28	+0.3
1,821,049	-		ABIE53_001633	0.28	+2.2
1,821,049	-		ABIE53_001633	0.28	+0.0
1,821,049	-		ABIE53_001633	0.28	-0.7
1,821,049	-		ABIE53_001633	0.28	+1.5
1,821,049	-		ABIE53_001633	0.28	+1.5
1,821,049	-		ABIE53_001633	0.28	+0.4
1,821,049	-		ABIE53_001633	0.28	-1.2
1,821,049	-		ABIE53_001633	0.28	-0.2
1,821,054	+		ABIE53_001633	0.28	-0.8
1,821,054	+		ABIE53_001633	0.28	-0.4
1,821,096	+		ABIE53_001633	0.29	-0.9
1,821,096	+		ABIE53_001633	0.29	-2.1
1,821,097	-		ABIE53_001633	0.29	+2.2
1,821,216	+		ABIE53_001633	0.33	-0.2
1,821,217	-		ABIE53_001633	0.33	+2.9
1,821,217	-		ABIE53_001633	0.33	+3.2
1,821,309	+		ABIE53_001633	0.35	+0.1
1,821,309	+		ABIE53_001633	0.35	-1.1
1,821,309	+		ABIE53_001633	0.35	-0.2
1,821,309	+		ABIE53_001633	0.35	+0.9
1,821,309	+		ABIE53_001633	0.35	-1.5
1,821,309	+		ABIE53_001633	0.35	-1.9
1,821,309	+		ABIE53_001633	0.35	-0.8
1,821,310	-		ABIE53_001633	0.35	-0.7
1,821,310	-		ABIE53_001633	0.35	-0.5
1,821,344	+		ABIE53_001633	0.36	+1.4
1,821,344	+		ABIE53_001633	0.36	+2.0
1,821,344	+		ABIE53_001633	0.36	-0.7
1,821,344	+		ABIE53_001633	0.36	+0.4
1,821,344	+		ABIE53_001633	0.36	-0.9
1,821,344	+		ABIE53_001633	0.36	-0.2
1,821,344	+		ABIE53_001633	0.36	-3.5
1,821,345	-		ABIE53_001633	0.36	-1.6
1,821,345	-		ABIE53_001633	0.36	-1.1
1,821,345	-		ABIE53_001633	0.36	+0.7
1,821,345	-		ABIE53_001633	0.36	-0.1
1,821,345	-		ABIE53_001633	0.36	-2.2
1,821,345	-		ABIE53_001633	0.36	+0.2
1,821,345	-		ABIE53_001633	0.36	+0.2
1,821,345	-		ABIE53_001633	0.36	-2.5
1,821,345	-		ABIE53_001633	0.36	+2.2
1,821,444	+		ABIE53_001633	0.39	-1.7
1,821,444	+		ABIE53_001633	0.39	+0.2
1,821,444	+		ABIE53_001633	0.39	-0.2
1,821,444	+		ABIE53_001633	0.39	-0.0
1,821,444	+		ABIE53_001633	0.39	-0.9
1,821,444	+		ABIE53_001633	0.39	-0.8
1,821,444	+		ABIE53_001633	0.39	+0.0
1,821,444	+		ABIE53_001633	0.39	+0.1
1,821,444	+		ABIE53_001633	0.39	-1.8
1,821,444	+		ABIE53_001633	0.39	-1.0
1,821,444	+		ABIE53_001633	0.39	-0.5
1,821,444	+		ABIE53_001633	0.39	-0.6
1,821,445	-		ABIE53_001633	0.39	+0.8
1,821,445	-		ABIE53_001633	0.39	-0.1
1,821,445	-		ABIE53_001633	0.39	+0.1
1,821,445	-		ABIE53_001633	0.39	-0.6
1,821,445	-		ABIE53_001633	0.39	+0.1
1,821,445	-		ABIE53_001633	0.39	+0.4
1,821,445	-		ABIE53_001633	0.39	+2.7
1,821,450	+		ABIE53_001633	0.39	+0.4
1,821,450	+		ABIE53_001633	0.39	-0.6
1,821,450	+		ABIE53_001633	0.39	+0.7
1,821,450	+		ABIE53_001633	0.39	-0.4
1,821,450	+		ABIE53_001633	0.39	-0.2
1,821,450	+		ABIE53_001633	0.39	+1.2
1,821,450	+		ABIE53_001633	0.39	+0.8
1,821,450	+		ABIE53_001633	0.39	+0.4
1,821,450	+		ABIE53_001633	0.39	-1.6
1,821,450	+		ABIE53_001633	0.39	-0.2
1,821,450	+		ABIE53_001633	0.39	-0.4
1,821,450	+		ABIE53_001633	0.39	-0.8
1,821,450	+		ABIE53_001633	0.39	+4.2
1,821,450	+		ABIE53_001633	0.39	+0.8
1,821,450	+		ABIE53_001633	0.39	-0.0
1,821,450	+		ABIE53_001633	0.39	+0.8
1,821,450	+		ABIE53_001633	0.39	+2.2
1,821,450	+		ABIE53_001633	0.39	-0.2
1,821,450	+		ABIE53_001633	0.39	-0.6
1,821,451	-		ABIE53_001633	0.39	+0.8
1,821,451	-		ABIE53_001633	0.39	-1.3
1,821,451	-		ABIE53_001633	0.39	-1.2
1,821,451	-		ABIE53_001633	0.39	-0.5
1,821,451	-		ABIE53_001633	0.39	+0.2
1,821,451	-		ABIE53_001633	0.39	-0.2
1,821,459	+		ABIE53_001633	0.39	+0.4
1,821,459	+		ABIE53_001633	0.39	+0.0
1,821,459	+		ABIE53_001633	0.39	-1.3
1,821,497	+		ABIE53_001633	0.40	+0.4
1,821,497	+		ABIE53_001633	0.40	+1.2
1,821,497	+		ABIE53_001633	0.40	-0.3
1,821,497	+		ABIE53_001633	0.40	+0.3
1,821,497	+		ABIE53_001633	0.40	+0.8
1,821,497	+		ABIE53_001633	0.40	+0.9
1,821,498	-		ABIE53_001633	0.40	+0.3
1,821,498	-		ABIE53_001633	0.40	-0.6
1,821,498	-		ABIE53_001633	0.40	-2.6
1,821,498	-		ABIE53_001633	0.40	+2.2
1,821,498	-		ABIE53_001633	0.40	+0.4
1,821,501	+		ABIE53_001633	0.40	-1.0
1,821,501	+		ABIE53_001633	0.40	-0.7
1,821,501	+		ABIE53_001633	0.40	-1.3
1,821,501	+		ABIE53_001633	0.40	+1.1
1,821,501	+		ABIE53_001633	0.40	-0.3
1,821,501	+		ABIE53_001633	0.40	-0.5
1,821,501	+		ABIE53_001633	0.40	+0.8
1,821,501	+		ABIE53_001633	0.40	-0.1
1,821,501	+		ABIE53_001633	0.40	-0.7
1,821,501	+		ABIE53_001633	0.40	+1.1
1,821,501	+		ABIE53_001633	0.40	-0.3
1,821,501	+		ABIE53_001633	0.40	-0.3
1,821,501	+		ABIE53_001633	0.40	-0.2
1,821,501	+		ABIE53_001633	0.40	-2.4
1,821,501	+		ABIE53_001633	0.40	+0.7
1,821,501	+		ABIE53_001633	0.40	-1.9
1,821,501	+		ABIE53_001633	0.40	-0.5
1,821,501	+		ABIE53_001633	0.40	-0.6
1,821,502	-		ABIE53_001633	0.41	+0.4
1,821,502	-		ABIE53_001633	0.41	+0.7
1,821,502	-		ABIE53_001633	0.41	-0.3
1,821,502	-		ABIE53_001633	0.41	-0.3
1,821,502	-		ABIE53_001633	0.41	-0.8
1,821,502	-		ABIE53_001633	0.41	-1.2
1,821,502	-		ABIE53_001633	0.41	-0.6
1,821,502	-		ABIE53_001633	0.41	-0.5
1,821,502	-		ABIE53_001633	0.41	-1.9
1,821,502	-		ABIE53_001633	0.41	+0.9
1,821,502	-		ABIE53_001633	0.41	+0.5
1,821,502	-		ABIE53_001633	0.41	-0.7
1,821,502	-		ABIE53_001633	0.41	-1.0
1,821,502	-		ABIE53_001633	0.41	+1.7
1,821,502	-		ABIE53_001633	0.41	-0.3
1,821,502	-		ABIE53_001633	0.41	+0.2
1,821,812	+		ABIE53_001633	0.49	+0.5
1,821,813	-		ABIE53_001633	0.49	-1.9
1,822,059	+		ABIE53_001633	0.56	+0.3
1,822,059	+		ABIE53_001633	0.56	-0.1
1,822,059	+		ABIE53_001633	0.56	+0.9
1,822,059	+		ABIE53_001633	0.56	+1.1
1,822,059	+		ABIE53_001633	0.56	-1.3
1,822,059	+		ABIE53_001633	0.56	+0.2
1,822,060	-		ABIE53_001633	0.56	+0.1
1,822,060	-		ABIE53_001633	0.56	-0.1
1,822,060	-		ABIE53_001633	0.56	+0.4
1,822,060	-		ABIE53_001633	0.56	+0.6
1,822,060	-		ABIE53_001633	0.56	+2.2
1,822,060	-		ABIE53_001633	0.56	+1.1
1,822,060	-		ABIE53_001633	0.56	+0.9
1,822,060	-		ABIE53_001633	0.56	+0.2
1,822,062	+		ABIE53_001633	0.56	+1.7
1,822,062	+		ABIE53_001633	0.56	-0.1
1,822,063	-		ABIE53_001633	0.56	-0.9
1,822,063	-		ABIE53_001633	0.56	+0.1
1,822,063	-		ABIE53_001633	0.56	-1.7
1,822,063	-		ABIE53_001633	0.56	+3.2
1,822,063	-		ABIE53_001633	0.56	+0.1
1,822,063	-		ABIE53_001633	0.56	-0.9
1,822,063	-		ABIE53_001633	0.56	-0.1
1,822,128	+		ABIE53_001633	0.58	-0.3
1,822,128	+		ABIE53_001633	0.58	-0.5
1,822,128	+		ABIE53_001633	0.58	-0.1
1,822,128	+		ABIE53_001633	0.58	-3.0
1,822,128	+		ABIE53_001633	0.58	-1.0
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1,823,430	+				-0.9
1,823,430	+				+0.1
1,823,430	+				-1.2
1,823,430	+				+0.9
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1,823,431	-				-2.1
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1,823,431	-				+4.6
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1,823,431	-				+1.0
1,823,431	-				-0.8
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1,823,590	+				-0.7
1,823,590	+				+1.2
1,823,590	+				+2.2
1,823,590	+				-0.9
1,823,590	+				+1.9
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1,823,590	+				+0.2
1,823,590	+				+1.1
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1,823,591	-				-2.6
1,823,591	-				-0.2
1,823,591	-				-0.5
1,823,591	-				+2.2
1,823,591	-				+0.1
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1,823,591	-				+0.3
1,823,591	-				+0.2
1,823,591	-				+2.7
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1,823,676	+				-0.6
1,823,676	+				+0.1
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1,823,677	-				+2.1
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1,824,137	+		ABIE53_001634	0.48	-0.1
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1,824,138	-		ABIE53_001634	0.48	-0.3
1,824,138	-		ABIE53_001634	0.48	+1.8
1,824,138	-		ABIE53_001634	0.48	+0.5
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1,824,568	-				-1.0
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1,824,568	-				-1.7
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