Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_000990

Experiment: Abietic Acid 5 mM in soil extract

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Abietic Acid 5 mM in soil extract
1,084,121	+				-0.8
1,084,121	+				-0.1
1,084,122	-				-0.1
1,084,122	-				+1.2
1,084,408	+		ABIE53_000989	0.35	-1.2
1,084,408	+		ABIE53_000989	0.35	+0.0
1,084,409	-		ABIE53_000989	0.35	+0.7
1,084,409	-		ABIE53_000989	0.35	-0.3
1,084,489	+		ABIE53_000989	0.47	+0.5
1,084,571	+		ABIE53_000989	0.59	-1.6
1,084,572	-		ABIE53_000989	0.59	+0.6
1,084,589	-		ABIE53_000989	0.62	+0.8
1,084,659	+		ABIE53_000989	0.72	+1.4
1,084,659	+		ABIE53_000989	0.72	-0.5
1,084,659	+		ABIE53_000989	0.72	-1.0
1,084,659	+		ABIE53_000989	0.72	+0.6
1,084,659	+		ABIE53_000989	0.72	-0.4
1,084,659	+		ABIE53_000989	0.72	+0.4
1,084,659	+		ABIE53_000989	0.72	-0.5
1,084,659	+		ABIE53_000989	0.72	-2.2
1,084,659	+		ABIE53_000989	0.72	-0.5
1,084,659	+		ABIE53_000989	0.72	+1.2
1,084,660	-		ABIE53_000989	0.72	-0.4
1,084,663	+		ABIE53_000989	0.73	+2.0
1,084,664	-		ABIE53_000989	0.73	-2.2
1,084,776	-		ABIE53_000989	0.90	-0.6
1,084,810	+				+0.3
1,084,810	+				+1.1
1,084,813	-				-0.4
1,084,813	-				+1.0
1,084,813	-				+1.1
1,084,813	-				-0.0
1,084,941	-				+0.5
1,084,941	-				-0.3
1,084,941	-				+0.0
1,084,946	+				+2.0
1,084,946	+				-1.8
1,084,946	+				-1.2
1,084,964	-				+1.1
1,084,997	-				-2.4
1,085,017	-				-1.5
1,085,017	-				+2.0
1,085,044	-				+0.2
1,085,075	+				-0.4
1,085,076	-				-0.6
1,085,076	-				+0.3
1,085,099	+				+0.4
1,085,099	+				+0.3
1,085,099	+				+1.6
1,085,100	-				-0.6
1,085,206	+				+2.4
1,085,207	-				-1.3
1,085,207	-				+0.3
1,085,265	+		ABIE53_000990	0.11	-0.6
1,085,265	+		ABIE53_000990	0.11	+0.3
1,085,265	+		ABIE53_000990	0.11	-0.5
1,085,265	+		ABIE53_000990	0.11	-0.7
1,085,266	-		ABIE53_000990	0.11	+1.5
1,085,266	-		ABIE53_000990	0.11	-2.0
1,085,266	-		ABIE53_000990	0.11	+0.6
1,085,266	-		ABIE53_000990	0.11	+1.8
1,085,266	-		ABIE53_000990	0.11	+1.1
1,085,266	-		ABIE53_000990	0.11	-0.3
1,085,339	+		ABIE53_000990	0.15	-1.1
1,085,340	-		ABIE53_000990	0.15	-0.7
1,085,340	-		ABIE53_000990	0.15	-0.2
1,085,340	-		ABIE53_000990	0.15	+0.6
1,085,340	-		ABIE53_000990	0.15	+0.1
1,085,350	+		ABIE53_000990	0.16	-0.8
1,085,380	+		ABIE53_000990	0.18	+0.2
1,085,380	+		ABIE53_000990	0.18	+1.6
1,085,380	+		ABIE53_000990	0.18	-0.6
1,085,381	-		ABIE53_000990	0.18	-0.6
1,085,469	+		ABIE53_000990	0.23	-0.6
1,085,469	+		ABIE53_000990	0.23	-0.4
1,085,469	+		ABIE53_000990	0.23	-0.7
1,085,469	+		ABIE53_000990	0.23	-1.5
1,085,469	+		ABIE53_000990	0.23	-0.8
1,085,469	+		ABIE53_000990	0.23	-0.6
1,085,469	+		ABIE53_000990	0.23	-0.8
1,085,470	-		ABIE53_000990	0.23	+0.0
1,085,646	+		ABIE53_000990	0.32	-0.9
1,085,646	+		ABIE53_000990	0.32	+1.4
1,085,646	+		ABIE53_000990	0.32	+0.6
1,085,646	+		ABIE53_000990	0.32	+0.3
1,085,646	+		ABIE53_000990	0.32	-0.5
1,085,646	+		ABIE53_000990	0.32	-0.4
1,085,647	-		ABIE53_000990	0.32	-0.3
1,085,647	-		ABIE53_000990	0.32	-1.1
1,085,647	-		ABIE53_000990	0.32	-1.1
1,085,647	-		ABIE53_000990	0.32	+0.1
1,085,647	-		ABIE53_000990	0.32	-0.5
1,085,647	-		ABIE53_000990	0.32	+1.4
1,085,647	-		ABIE53_000990	0.32	-1.4
1,085,721	+		ABIE53_000990	0.37	+0.0
1,085,722	-		ABIE53_000990	0.37	+0.5
1,085,754	+		ABIE53_000990	0.38	-0.5
1,085,754	+		ABIE53_000990	0.38	+2.4
1,085,755	-		ABIE53_000990	0.39	-2.0
1,085,781	-		ABIE53_000990	0.40	+1.0
1,085,781	-		ABIE53_000990	0.40	-0.7
1,085,844	+		ABIE53_000990	0.44	-0.6
1,085,844	+		ABIE53_000990	0.44	+1.0
1,085,845	-		ABIE53_000990	0.44	-1.9
1,085,845	-		ABIE53_000990	0.44	-2.1
1,085,845	-		ABIE53_000990	0.44	-0.4
1,085,845	-		ABIE53_000990	0.44	+2.4
1,085,845	-		ABIE53_000990	0.44	-0.7
1,085,845	-		ABIE53_000990	0.44	-0.4
1,085,862	+		ABIE53_000990	0.45	-0.7
1,085,862	+		ABIE53_000990	0.45	+1.3
1,085,862	+		ABIE53_000990	0.45	-0.4
1,085,863	-		ABIE53_000990	0.45	-1.7
1,085,868	+		ABIE53_000990	0.45	-0.8
1,085,868	+		ABIE53_000990	0.45	+0.6
1,085,869	-		ABIE53_000990	0.45	-1.0
1,085,964	-		ABIE53_000990	0.50	+0.4
1,086,042	+		ABIE53_000990	0.55	-1.4
1,086,073	+		ABIE53_000990	0.56	+3.4
1,086,073	+		ABIE53_000990	0.56	+1.0
1,086,074	-		ABIE53_000990	0.56	-1.7
1,086,074	-		ABIE53_000990	0.56	-1.3
1,086,096	+		ABIE53_000990	0.58	-0.2
1,086,096	+		ABIE53_000990	0.58	-0.3
1,086,096	+		ABIE53_000990	0.58	-2.2
1,086,096	+		ABIE53_000990	0.58	+1.6
1,086,096	+		ABIE53_000990	0.58	+2.4
1,086,097	-		ABIE53_000990	0.58	+0.7
1,086,097	-		ABIE53_000990	0.58	+2.4
1,086,097	-		ABIE53_000990	0.58	+0.3
1,086,268	+		ABIE53_000990	0.67	-0.9
1,086,268	+		ABIE53_000990	0.67	-0.1
1,086,268	+		ABIE53_000990	0.67	+0.6
1,086,269	-		ABIE53_000990	0.67	-0.8
1,086,436	+		ABIE53_000990	0.77	-0.0
1,086,436	+		ABIE53_000990	0.77	-0.5
1,086,436	+		ABIE53_000990	0.77	+0.7
1,086,436	+		ABIE53_000990	0.77	+2.4
1,086,437	-		ABIE53_000990	0.77	-1.6
1,086,437	-		ABIE53_000990	0.77	+0.3
1,086,437	-		ABIE53_000990	0.77	-1.3
1,086,437	-		ABIE53_000990	0.77	-0.4
1,086,437	-		ABIE53_000990	0.77	-1.1
1,086,556	+		ABIE53_000990	0.83	-0.9
1,086,834	+				+0.3
1,086,834	+				-0.3
1,086,834	+				+4.0
1,086,834	+				-1.0
1,086,834	+				+0.6
1,086,834	+				+0.3
1,086,834	+				+1.2
1,086,834	+				+0.3
1,086,835	-				+0.0
1,086,835	-				-1.3
1,086,835	-				+1.0
1,086,910	+				-0.8
1,086,910	+				-0.3
1,086,910	+				+1.3
1,086,981	+				-1.1
1,086,982	-				-0.6
1,087,085	+		ABIE53_000991	0.13	-0.5
1,087,085	+		ABIE53_000991	0.13	-0.8
1,087,085	+		ABIE53_000991	0.13	-1.0
1,087,085	+		ABIE53_000991	0.13	+2.4
1,087,085	+		ABIE53_000991	0.13	-0.9
1,087,085	+		ABIE53_000991	0.13	+3.4
1,087,086	-		ABIE53_000991	0.13	-0.4
1,087,086	-		ABIE53_000991	0.13	-0.0
1,087,086	-		ABIE53_000991	0.13	+1.0
1,087,089	+		ABIE53_000991	0.13	+0.4
1,087,089	+		ABIE53_000991	0.13	-0.4
1,087,089	+		ABIE53_000991	0.13	+2.4
1,087,089	+		ABIE53_000991	0.13	-0.1
1,087,089	+		ABIE53_000991	0.13	+2.4
1,087,089	+		ABIE53_000991	0.13	+0.1
1,087,089	+		ABIE53_000991	0.13	-0.1
1,087,090	-		ABIE53_000991	0.13	-1.2
1,087,090	-		ABIE53_000991	0.13	-0.5
1,087,090	-		ABIE53_000991	0.13	-0.1
1,087,090	-		ABIE53_000991	0.13	-1.3
1,087,090	-		ABIE53_000991	0.13	-0.7
1,087,091	+		ABIE53_000991	0.14	-0.4
1,087,179	+		ABIE53_000991	0.20	+0.0
1,087,179	+		ABIE53_000991	0.20	-0.5
1,087,179	+		ABIE53_000991	0.20	-0.3
1,087,180	-		ABIE53_000991	0.20	-0.9
1,087,180	-		ABIE53_000991	0.20	-0.8
1,087,180	-		ABIE53_000991	0.20	+3.7
1,087,318	-		ABIE53_000991	0.30	+0.2
1,087,366	-		ABIE53_000991	0.33	-0.1
1,087,366	-		ABIE53_000991	0.33	-0.4
1,087,366	-		ABIE53_000991	0.33	-0.6
1,087,400	-		ABIE53_000991	0.35	-0.7
1,087,544	+		ABIE53_000991	0.46	-0.0
1,087,544	+		ABIE53_000991	0.46	-1.4
1,087,545	-		ABIE53_000991	0.46	+2.4
1,087,565	+		ABIE53_000991	0.47	-0.3
1,087,731	+		ABIE53_000991	0.59	+4.0
1,087,732	-		ABIE53_000991	0.59	-0.9
1,087,734	+		ABIE53_000991	0.59	+0.8
1,087,734	+		ABIE53_000991	0.59	-0.2
1,087,734	+		ABIE53_000991	0.59	+0.2
1,087,734	+		ABIE53_000991	0.59	-0.3
1,087,735	-		ABIE53_000991	0.59	-0.6
1,087,803	+		ABIE53_000991	0.64	-0.0
1,087,818	+		ABIE53_000991	0.65	-1.6
1,087,819	-		ABIE53_000991	0.65	-0.9
1,087,840	-		ABIE53_000991	0.67	-0.2
1,087,840	-		ABIE53_000991	0.67	-0.4
1,087,840	-		ABIE53_000991	0.67	+1.4