Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22450

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
5,045,572	+		PFLU_RS22445	0.23	+0.5
5,045,572	+		PFLU_RS22445	0.23	-1.0
5,045,572	+		PFLU_RS22445	0.23	-0.6
5,045,572	+		PFLU_RS22445	0.23	-0.7
5,045,572	+		PFLU_RS22445	0.23	-0.3
5,045,572	+		PFLU_RS22445	0.23	-2.8
5,045,572	+		PFLU_RS22445	0.23	-1.3
5,045,572	+		PFLU_RS22445	0.23	+0.5
5,045,572	+		PFLU_RS22445	0.23	+1.7
5,045,572	+		PFLU_RS22445	0.23	-0.8
5,045,572	+		PFLU_RS22445	0.23	-0.3
5,045,572	+		PFLU_RS22445	0.23	-3.0
5,045,572	+		PFLU_RS22445	0.23	-3.8
5,045,572	+		PFLU_RS22445	0.23	-1.3
5,045,572	+		PFLU_RS22445	0.23	+0.3
5,045,572	+		PFLU_RS22445	0.23	-0.5
5,045,573	-		PFLU_RS22445	0.23	+0.1
5,045,573	-		PFLU_RS22445	0.23	+1.1
5,045,573	-		PFLU_RS22445	0.23	-1.4
5,045,573	-		PFLU_RS22445	0.23	-0.1
5,045,573	-		PFLU_RS22445	0.23	+1.2
5,045,573	-		PFLU_RS22445	0.23	+1.3
5,045,573	-		PFLU_RS22445	0.23	-2.3
5,045,573	-		PFLU_RS22445	0.23	-2.9
5,045,573	-		PFLU_RS22445	0.23	+0.4
5,045,573	-		PFLU_RS22445	0.23	+0.3
5,045,573	-		PFLU_RS22445	0.23	+3.4
5,045,573	-		PFLU_RS22445	0.23	-0.8
5,045,617	+		PFLU_RS22445	0.27	+0.6
5,045,617	+		PFLU_RS22445	0.27	+0.4
5,045,617	+		PFLU_RS22445	0.27	-2.8
5,045,617	+		PFLU_RS22445	0.27	-2.1
5,045,617	+		PFLU_RS22445	0.27	+1.5
5,045,617	+		PFLU_RS22445	0.27	-0.9
5,045,618	-		PFLU_RS22445	0.27	+1.9
5,045,618	-		PFLU_RS22445	0.27	+2.2
5,045,618	-		PFLU_RS22445	0.27	-1.8
5,045,618	-		PFLU_RS22445	0.27	+0.4
5,045,618	-		PFLU_RS22445	0.27	-0.9
5,045,618	-		PFLU_RS22445	0.27	-0.3
5,045,618	-		PFLU_RS22445	0.27	-0.6
5,045,618	-		PFLU_RS22445	0.27	+0.2
5,045,632	+		PFLU_RS22445	0.29	+0.0
5,045,632	+		PFLU_RS22445	0.29	+3.0
5,045,633	-		PFLU_RS22445	0.29	+2.0
5,045,667	+		PFLU_RS22445	0.33	-1.1
5,045,761	+		PFLU_RS22445	0.42	-0.6
5,045,761	+		PFLU_RS22445	0.42	-0.9
5,045,761	+		PFLU_RS22445	0.42	+0.6
5,045,761	+		PFLU_RS22445	0.42	+1.1
5,045,761	+		PFLU_RS22445	0.42	-0.9
5,045,761	+		PFLU_RS22445	0.42	+0.2
5,045,761	+		PFLU_RS22445	0.42	-2.2
5,045,761	+		PFLU_RS22445	0.42	+0.3
5,045,761	+		PFLU_RS22445	0.42	-0.5
5,045,761	+		PFLU_RS22445	0.42	+2.2
5,045,761	+		PFLU_RS22445	0.42	-2.6
5,045,761	+		PFLU_RS22445	0.42	+0.0
5,045,761	+		PFLU_RS22445	0.42	-2.0
5,045,761	+		PFLU_RS22445	0.42	+2.3
5,045,761	+		PFLU_RS22445	0.42	+0.0
5,045,761	+		PFLU_RS22445	0.42	-0.7
5,045,761	+		PFLU_RS22445	0.42	+0.4
5,045,761	+		PFLU_RS22445	0.42	+0.0
5,045,761	+		PFLU_RS22445	0.42	+1.5
5,045,761	+		PFLU_RS22445	0.42	+1.7
5,045,761	+		PFLU_RS22445	0.42	+1.4
5,045,761	+		PFLU_RS22445	0.42	-0.6
5,045,761	+		PFLU_RS22445	0.42	-1.7
5,045,761	+		PFLU_RS22445	0.42	+2.0
5,045,761	+		PFLU_RS22445	0.42	+1.1
5,045,761	+		PFLU_RS22445	0.42	-1.7
5,045,762	-		PFLU_RS22445	0.42	-0.8
5,045,762	-		PFLU_RS22445	0.42	+0.8
5,045,762	-		PFLU_RS22445	0.42	+0.0
5,045,762	-		PFLU_RS22445	0.42	+1.8
5,045,762	-		PFLU_RS22445	0.42	+1.9
5,045,762	-		PFLU_RS22445	0.42	+0.4
5,045,762	-		PFLU_RS22445	0.42	+1.0
5,045,762	-		PFLU_RS22445	0.42	+2.0
5,045,762	-		PFLU_RS22445	0.42	-0.6
5,045,762	-		PFLU_RS22445	0.42	+0.6
5,045,762	-		PFLU_RS22445	0.42	-1.8
5,045,762	-		PFLU_RS22445	0.42	-1.4
5,045,762	-		PFLU_RS22445	0.42	+1.8
5,045,762	-		PFLU_RS22445	0.42	+0.8
5,045,762	-		PFLU_RS22445	0.42	-1.9
5,045,762	-		PFLU_RS22445	0.42	+0.6
5,045,762	-		PFLU_RS22445	0.42	-0.5
5,045,762	-		PFLU_RS22445	0.42	+0.5
5,045,762	-		PFLU_RS22445	0.42	-0.8
5,045,762	-		PFLU_RS22445	0.42	-1.8
5,045,762	-		PFLU_RS22445	0.42	+0.0
5,045,762	-		PFLU_RS22445	0.42	+0.3
5,045,762	-		PFLU_RS22445	0.42	+0.0
5,045,762	-		PFLU_RS22445	0.42	+2.0
5,045,797	+		PFLU_RS22445	0.46	-0.4
5,045,798	-		PFLU_RS22445	0.46	-0.4
5,045,798	-		PFLU_RS22445	0.46	+0.0
5,045,798	-		PFLU_RS22445	0.46	-2.9
5,045,798	-		PFLU_RS22445	0.46	+1.6
5,045,798	-		PFLU_RS22445	0.46	-0.5
5,045,818	+		PFLU_RS22445	0.48	+0.1
5,045,818	+		PFLU_RS22445	0.48	-1.7
5,045,818	+		PFLU_RS22445	0.48	+1.2
5,045,818	+		PFLU_RS22445	0.48	+1.1
5,045,818	+		PFLU_RS22445	0.48	+2.8
5,045,818	+		PFLU_RS22445	0.48	-0.3
5,045,819	-		PFLU_RS22445	0.48	-3.0
5,045,819	-		PFLU_RS22445	0.48	-0.4
5,045,819	-		PFLU_RS22445	0.48	-1.2
5,045,819	-		PFLU_RS22445	0.48	-1.0
5,045,819	-		PFLU_RS22445	0.48	+1.0
5,045,819	-		PFLU_RS22445	0.48	-1.0
5,045,819	-		PFLU_RS22445	0.48	-0.9
5,045,985	+		PFLU_RS22445	0.66	-0.2
5,045,985	+		PFLU_RS22445	0.66	+0.7
5,045,985	+		PFLU_RS22445	0.66	+0.8
5,045,985	+		PFLU_RS22445	0.66	+0.0
5,045,985	+		PFLU_RS22445	0.66	+1.0
5,045,985	+		PFLU_RS22445	0.66	-3.2
5,045,985	+		PFLU_RS22445	0.66	+0.3
5,045,985	+		PFLU_RS22445	0.66	+0.5
5,045,985	+		PFLU_RS22445	0.66	+0.2
5,045,986	-		PFLU_RS22445	0.66	+0.9
5,045,986	-		PFLU_RS22445	0.66	-1.4
5,045,986	-		PFLU_RS22445	0.66	-0.6
5,045,986	-		PFLU_RS22445	0.66	-0.9
5,045,986	-		PFLU_RS22445	0.66	+1.1
5,045,986	-		PFLU_RS22445	0.66	+0.6
5,046,052	+		PFLU_RS22445	0.73	+0.9
5,046,052	+		PFLU_RS22445	0.73	-0.9
5,046,052	+		PFLU_RS22445	0.73	-2.7
5,046,053	-		PFLU_RS22445	0.73	-1.0
5,046,053	-		PFLU_RS22445	0.73	-2.0
5,046,214	+		PFLU_RS22445	0.89	+2.0
5,046,214	+		PFLU_RS22445	0.89	+1.8
5,046,214	+		PFLU_RS22445	0.89	+0.1
5,046,214	+		PFLU_RS22445	0.89	-1.0
5,046,214	+		PFLU_RS22445	0.89	-3.1
5,046,214	+		PFLU_RS22445	0.89	+1.3
5,046,214	+		PFLU_RS22445	0.89	+0.8
5,046,214	+		PFLU_RS22445	0.89	-0.5
5,046,215	-		PFLU_RS22445	0.90	-1.2
5,046,215	-		PFLU_RS22445	0.90	-1.0
5,046,215	-		PFLU_RS22445	0.90	-0.1
5,046,230	+				-2.5
5,046,231	-				+2.2
5,046,231	-				+0.8
5,046,250	+				-1.0
5,046,250	+				-0.9
5,046,251	-				+0.0
5,046,251	-				-2.7
5,046,282	+				+3.1
5,046,287	+				-0.3
5,046,287	+				-1.3
5,046,287	+				+0.6
5,046,287	+				+0.4
5,046,287	+				+0.2
5,046,287	+				-1.3
5,046,287	+				+0.2
5,046,287	+				+0.3
5,046,287	+				-1.8
5,046,287	+				-2.3
5,046,288	-				+0.7
5,046,288	-				+0.4
5,046,288	-				-0.8
5,046,288	-				+1.2
5,046,288	-				-2.2
5,046,288	-				-0.8
5,046,288	-				+0.2
5,046,308	+				-1.0
5,046,371	+				+0.4
5,046,371	+				+3.3
5,046,371	+				+0.0
5,046,371	+				+1.1
5,046,371	+				+0.6
5,046,371	+				-0.4
5,046,372	-				-0.2
5,046,372	-				+0.8
5,046,372	-				+1.2
5,046,372	-				-0.6
5,046,380	+				+2.0
5,046,381	-				-3.0
5,046,381	-				-2.6
5,046,381	-				-0.7
5,046,381	-				-0.3
5,046,561	+		PFLU_RS22450	0.16	+1.6
5,046,561	+		PFLU_RS22450	0.16	-1.7
5,046,616	+		PFLU_RS22450	0.23	-0.1
5,046,616	+		PFLU_RS22450	0.23	-0.3
5,046,616	+		PFLU_RS22450	0.23	-0.7
5,046,616	+		PFLU_RS22450	0.23	-1.2
5,046,616	+		PFLU_RS22450	0.23	+1.4
5,046,617	-		PFLU_RS22450	0.23	+0.9
5,046,617	-		PFLU_RS22450	0.23	-2.4
5,046,895	+		PFLU_RS22450	0.55	-0.8
5,046,895	+		PFLU_RS22450	0.55	+0.7
5,046,896	-		PFLU_RS22450	0.55	-2.4
5,046,896	-		PFLU_RS22450	0.55	-1.7
5,047,060	+		PFLU_RS22450	0.74	-1.3
5,047,060	+		PFLU_RS22450	0.74	+0.8
5,047,061	-		PFLU_RS22450	0.74	+0.6
5,047,061	-		PFLU_RS22450	0.74	+2.0
5,047,061	-		PFLU_RS22450	0.74	-0.5
5,047,061	-		PFLU_RS22450	0.74	+1.2
5,047,061	-		PFLU_RS22450	0.74	-1.2
5,047,061	-		PFLU_RS22450	0.74	-2.0
5,047,169	-		PFLU_RS22450	0.87	+1.3
5,047,318	-				+0.8
5,047,318	-				-1.4
5,047,338	+				+2.6
5,047,338	+				+0.9
5,047,339	-				-0.1
5,047,339	-				+1.1
5,047,339	-				+0.6
5,047,339	-				-1.0
5,047,339	-				-0.9
5,047,351	-				-1.3
5,047,351	-				+0.9
5,047,400	+				+0.4
5,047,400	+				-2.4
5,047,400	+				-2.4
5,047,400	+				-1.4
5,047,400	+				+0.0
5,047,400	+				-0.6
5,047,401	-				+1.1
5,047,401	-				+3.6
5,047,401	-				+1.6
5,047,401	-				+1.3
5,047,477	+				-0.4
5,047,477	+				+0.7
5,047,478	-				-1.4
5,047,485	+				+1.0
5,047,485	+				-1.7
5,047,485	+				-0.9
5,047,485	+				+0.9
5,047,485	+				+1.3
5,047,486	-				+1.9
5,047,486	-				+1.7
5,047,486	-				-1.2
5,047,486	-				+0.3
5,047,486	-				-0.4
5,047,486	-				+0.1
5,047,641	+		PFLU_RS22455	0.24	-1.3
5,047,641	+		PFLU_RS22455	0.24	-1.0
5,047,641	+		PFLU_RS22455	0.24	-0.8
5,047,641	+		PFLU_RS22455	0.24	-1.7
5,047,641	+		PFLU_RS22455	0.24	-0.1
5,047,641	+		PFLU_RS22455	0.24	+2.7
5,047,641	+		PFLU_RS22455	0.24	-1.8
5,047,641	+		PFLU_RS22455	0.24	+0.4
5,047,641	+		PFLU_RS22455	0.24	+1.6
5,047,641	+		PFLU_RS22455	0.24	-1.2
5,047,641	+		PFLU_RS22455	0.24	+2.0
5,047,641	+		PFLU_RS22455	0.24	+1.3
5,047,642	-		PFLU_RS22455	0.24	-0.3
5,047,642	-		PFLU_RS22455	0.24	+0.9
5,047,642	-		PFLU_RS22455	0.24	+0.0
5,047,642	-		PFLU_RS22455	0.24	-1.8
5,047,642	-		PFLU_RS22455	0.24	+0.4
5,047,642	-		PFLU_RS22455	0.24	-2.8
5,047,642	-		PFLU_RS22455	0.24	+0.0
5,047,642	-		PFLU_RS22455	0.24	+0.4
5,047,683	+		PFLU_RS22455	0.31	+0.7
5,047,683	+		PFLU_RS22455	0.31	-2.1
5,047,683	+		PFLU_RS22455	0.31	+0.0
5,047,683	+		PFLU_RS22455	0.31	-0.2
5,047,683	+		PFLU_RS22455	0.31	-2.3
5,047,683	+		PFLU_RS22455	0.31	+1.1
5,047,683	+		PFLU_RS22455	0.31	+1.7
5,047,683	+		PFLU_RS22455	0.31	+0.4
5,047,683	+		PFLU_RS22455	0.31	+1.3
5,047,683	+		PFLU_RS22455	0.31	-0.3
5,047,683	+		PFLU_RS22455	0.31	-1.9
5,047,684	-		PFLU_RS22455	0.31	+3.0
5,047,684	-		PFLU_RS22455	0.31	+0.9
5,047,684	-		PFLU_RS22455	0.31	-1.6
5,047,684	-		PFLU_RS22455	0.31	+0.4
5,047,857	+		PFLU_RS22455	0.61	-1.0
5,047,905	+		PFLU_RS22455	0.69	-1.8
5,047,905	+		PFLU_RS22455	0.69	-0.3
5,047,905	+		PFLU_RS22455	0.69	-0.3
5,047,906	-		PFLU_RS22455	0.69	-1.4
5,047,906	-		PFLU_RS22455	0.69	-0.6
5,047,906	-		PFLU_RS22455	0.69	+1.4
5,047,906	-		PFLU_RS22455	0.69	-0.1
5,047,906	-		PFLU_RS22455	0.69	-1.6
5,047,950	+		PFLU_RS22455	0.76	+0.0
5,047,951	-		PFLU_RS22455	0.76	+1.4
5,047,951	-		PFLU_RS22455	0.76	-2.1
5,047,951	-		PFLU_RS22455	0.76	+1.0
5,047,951	-		PFLU_RS22455	0.76	-0.3
5,047,953	+		PFLU_RS22455	0.77	+2.0
5,047,954	-		PFLU_RS22455	0.77	+0.4
5,047,954	-		PFLU_RS22455	0.77	-0.1
5,047,954	-		PFLU_RS22455	0.77	-0.3
5,047,954	-		PFLU_RS22455	0.77	+0.1
5,047,954	-		PFLU_RS22455	0.77	-0.8
5,048,001	+		PFLU_RS22455	0.85	+0.3
5,048,001	+		PFLU_RS22455	0.85	-0.5
5,048,001	+		PFLU_RS22455	0.85	-0.7
5,048,002	-		PFLU_RS22455	0.85	-0.3
5,048,002	-		PFLU_RS22455	0.85	+0.8
5,048,002	-		PFLU_RS22455	0.85	+1.4
5,048,002	-		PFLU_RS22455	0.85	+1.0
5,048,002	-		PFLU_RS22455	0.85	+1.0
5,048,046	-				+2.5
5,048,076	-				+1.6
5,048,092	+				+2.0
5,048,092	+				-2.1
5,048,093	-				+1.0
5,048,140	+				-1.6
5,048,140	+				+1.6
5,048,140	+				+0.4
5,048,140	+				-2.1
5,048,140	+				-1.3
5,048,140	+				+2.1
5,048,140	+				-2.7
5,048,140	+				+1.0
5,048,140	+				+1.0
5,048,140	+				-1.0
5,048,140	+				-1.9
5,048,140	+				+1.3
5,048,141	-				+1.0
5,048,141	-				+0.6
5,048,141	-				-2.2
5,048,141	-				+1.7
5,048,141	-				+0.9
5,048,150	-				-1.2
5,048,162	+				-1.8
5,048,162	+				+2.0
5,048,164	+				+2.0
5,048,164	+				-2.7
5,048,164	+				+0.8
5,048,164	+				+1.6
5,048,164	+				-2.1
5,048,164	+				-0.3
5,048,164	+				-0.1
5,048,164	+				-0.8
5,048,164	+				-0.8
5,048,164	+				-0.3
5,048,164	+				-0.4
5,048,164	+				+1.2
5,048,164	+				-0.6
5,048,164	+				+0.4
5,048,164	+				+0.4
5,048,164	+				-0.8
5,048,164	+				-0.3
5,048,164	+				-0.2
5,048,164	+				+0.7
5,048,164	+				+0.1
5,048,164	+				+0.7
5,048,164	+				+0.1
5,048,164	+				+1.1
5,048,164	+				-1.9
5,048,165	-				-0.4
5,048,165	-				+0.3
5,048,165	-				+2.0
5,048,165	-				-0.8
5,048,165	-				+0.9
5,048,165	-				-2.4
5,048,165	-				-0.8
5,048,165	-				-1.3
5,048,165	-				-0.3
5,048,165	-				-1.3
5,048,165	-				+3.0
5,048,165	-				+1.2
5,048,165	-				-2.2
5,048,165	-				+0.7
5,048,168	+				-2.0
5,048,169	-				-3.0
5,048,226	-		PFLU_RS22460	0.13	+0.7
5,048,226	-		PFLU_RS22460	0.13	+1.1
5,048,250	+		PFLU_RS22460	0.15	-2.1
5,048,250	+		PFLU_RS22460	0.15	-2.2
5,048,250	+		PFLU_RS22460	0.15	-1.3
5,048,250	+		PFLU_RS22460	0.15	-1.6
5,048,251	-		PFLU_RS22460	0.15	+0.0
5,048,251	-		PFLU_RS22460	0.15	-0.8
5,048,275	-		PFLU_RS22460	0.18	+0.8
5,048,275	-		PFLU_RS22460	0.18	+0.5
5,048,275	-		PFLU_RS22460	0.18	+0.6
5,048,275	-		PFLU_RS22460	0.18	-0.1
5,048,275	-		PFLU_RS22460	0.18	-1.7
5,048,275	-		PFLU_RS22460	0.18	+0.1