Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10715

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
2,361,423	-		PFLU_RS10710	0.77	+1.1
2,361,444	+		PFLU_RS10710	0.78	-0.0
2,361,444	+		PFLU_RS10710	0.78	+0.5
2,361,444	+		PFLU_RS10710	0.78	-1.5
2,361,444	+		PFLU_RS10710	0.78	+1.4
2,361,444	+		PFLU_RS10710	0.78	+1.4
2,361,444	+		PFLU_RS10710	0.78	+0.5
2,361,445	-		PFLU_RS10710	0.78	-0.4
2,361,445	-		PFLU_RS10710	0.78	-0.9
2,361,510	-		PFLU_RS10710	0.80	+1.6
2,361,561	+		PFLU_RS10710	0.82	+1.0
2,361,561	+		PFLU_RS10710	0.82	-0.5
2,361,561	+		PFLU_RS10710	0.82	-1.6
2,361,561	+		PFLU_RS10710	0.82	+1.9
2,361,561	+		PFLU_RS10710	0.82	-0.5
2,361,561	+		PFLU_RS10710	0.82	+0.4
2,361,561	+		PFLU_RS10710	0.82	-0.5
2,361,562	-		PFLU_RS10710	0.82	-0.1
2,361,717	+		PFLU_RS10710	0.88	-0.7
2,361,717	+		PFLU_RS10710	0.88	-2.1
2,361,717	+		PFLU_RS10710	0.88	-1.7
2,361,717	+		PFLU_RS10710	0.88	-1.1
2,361,717	+		PFLU_RS10710	0.88	-0.1
2,361,717	+		PFLU_RS10710	0.88	-2.4
2,361,717	+		PFLU_RS10710	0.88	-1.0
2,361,717	+		PFLU_RS10710	0.88	+0.3
2,361,717	+		PFLU_RS10710	0.88	-3.0
2,361,717	+		PFLU_RS10710	0.88	-0.5
2,361,718	-		PFLU_RS10710	0.88	+0.5
2,361,718	-		PFLU_RS10710	0.88	+0.9
2,361,718	-		PFLU_RS10710	0.88	-0.1
2,361,927	+				-0.1
2,361,927	+				-0.1
2,361,927	+				-1.0
2,361,928	-				-0.1
2,361,928	-				-1.7
2,361,957	+				-2.3
2,361,958	-				-2.0
2,361,990	+				-0.7
2,361,990	+				+1.7
2,361,990	+				-2.1
2,361,990	+				-1.0
2,361,990	+				-0.5
2,361,991	-				-0.3
2,361,991	-				+0.3
2,361,991	-				-0.3
2,361,991	-				+0.3
2,362,020	+				-1.0
2,362,020	+				-1.1
2,362,021	-				-1.3
2,362,021	-				-0.7
2,362,023	+				+0.9
2,362,023	+				-2.7
2,362,023	+				-1.5
2,362,023	+				-2.4
2,362,023	+				-2.8
2,362,023	+				-2.0
2,362,023	+				-2.5
2,362,024	-				-1.1
2,362,024	-				+4.1
2,362,024	-				-0.6
2,362,024	-				+1.9
2,362,024	-				-1.8
2,362,024	-				+3.4
2,362,024	-				+1.5
2,362,024	-				-0.5
2,362,024	-				+0.7
2,362,024	-				+0.9
2,362,024	-				+1.9
2,362,024	-				-0.6
2,362,024	-				-2.1
2,362,024	-				+0.3
2,362,024	-				+0.3
2,362,031	+				-1.2
2,362,031	+				-1.7
2,362,032	-				-0.8
2,362,032	-				+1.0
2,362,048	-				+3.2
2,362,048	-				-1.6
2,362,065	+				+3.1
2,362,066	-				+1.9
2,362,066	-				+0.6
2,362,066	-				+2.6
2,362,066	-				-0.4
2,362,285	+		PFLU_RS10715	0.31	+1.0
2,362,285	+		PFLU_RS10715	0.31	-1.2
2,362,285	+		PFLU_RS10715	0.31	+0.3
2,362,285	+		PFLU_RS10715	0.31	+3.4
2,362,285	+		PFLU_RS10715	0.31	+2.7
2,362,285	+		PFLU_RS10715	0.31	+2.2
2,362,285	+		PFLU_RS10715	0.31	+2.0
2,362,286	-		PFLU_RS10715	0.31	+1.3
2,362,286	-		PFLU_RS10715	0.31	+1.9
2,362,286	-		PFLU_RS10715	0.31	+1.2
2,362,286	-		PFLU_RS10715	0.31	+3.4
2,362,485	+		PFLU_RS10715	0.58	+1.2
2,362,486	-		PFLU_RS10715	0.59	+1.6
2,362,534	-		PFLU_RS10715	0.65	+2.7
2,362,534	-		PFLU_RS10715	0.65	-1.1
2,362,540	+		PFLU_RS10715	0.66	+2.2
2,362,540	+		PFLU_RS10715	0.66	+1.7
2,362,540	+		PFLU_RS10715	0.66	+0.9
2,362,540	+		PFLU_RS10715	0.66	-0.5
2,362,540	+		PFLU_RS10715	0.66	+2.3
2,362,540	+		PFLU_RS10715	0.66	+0.9
2,362,540	+		PFLU_RS10715	0.66	+2.4
2,362,540	+		PFLU_RS10715	0.66	+1.5
2,362,540	+		PFLU_RS10715	0.66	+3.6
2,362,541	-		PFLU_RS10715	0.66	+0.3
2,362,541	-		PFLU_RS10715	0.66	+1.6
2,362,541	-		PFLU_RS10715	0.66	+3.2
2,362,541	-		PFLU_RS10715	0.66	+0.6
2,362,541	-		PFLU_RS10715	0.66	-0.2
2,362,541	-		PFLU_RS10715	0.66	+0.9
2,362,541	-		PFLU_RS10715	0.66	+0.9
2,362,541	-		PFLU_RS10715	0.66	-1.7
2,362,558	-		PFLU_RS10715	0.69	+2.4
2,362,558	-		PFLU_RS10715	0.69	-0.5
2,362,608	+		PFLU_RS10715	0.76	+2.4
2,362,608	+		PFLU_RS10715	0.76	+1.6
2,362,608	+		PFLU_RS10715	0.76	+2.3
2,362,608	+		PFLU_RS10715	0.76	+3.6
2,362,608	+		PFLU_RS10715	0.76	+1.9
2,362,608	+		PFLU_RS10715	0.76	+0.9
2,362,608	+		PFLU_RS10715	0.76	+3.6
2,362,608	+		PFLU_RS10715	0.76	+1.9
2,362,608	+		PFLU_RS10715	0.76	-0.0
2,362,608	+		PFLU_RS10715	0.76	+0.5
2,362,608	+		PFLU_RS10715	0.76	+2.4
2,362,608	+		PFLU_RS10715	0.76	+1.5
2,362,608	+		PFLU_RS10715	0.76	-0.1
2,362,608	+		PFLU_RS10715	0.76	+2.3
2,362,609	-		PFLU_RS10715	0.76	-0.7
2,362,609	-		PFLU_RS10715	0.76	+1.5
2,362,609	-		PFLU_RS10715	0.76	+2.0
2,362,609	-		PFLU_RS10715	0.76	+0.9
2,362,609	-		PFLU_RS10715	0.76	-0.0
2,362,609	-		PFLU_RS10715	0.76	+3.0
2,362,609	-		PFLU_RS10715	0.76	+1.6
2,362,609	-		PFLU_RS10715	0.76	+5.2
2,362,609	-		PFLU_RS10715	0.76	+0.5
2,362,609	-		PFLU_RS10715	0.76	+2.0
2,362,612	+		PFLU_RS10715	0.76	-1.1
2,362,613	-		PFLU_RS10715	0.76	+1.5
2,362,613	-		PFLU_RS10715	0.76	+2.9
2,362,664	+		PFLU_RS10715	0.83	+2.4
2,362,665	-		PFLU_RS10715	0.84	+1.6
2,362,665	-		PFLU_RS10715	0.84	+2.9
2,362,665	-		PFLU_RS10715	0.84	+1.1
2,362,737	+				+2.9
2,362,738	-				+0.9
2,362,738	-				+0.0
2,362,770	+				+1.9
2,362,774	-				+3.0
2,362,780	+				-0.9
2,362,781	-				+0.9
2,362,781	-				+1.5
2,362,781	-				-0.7
2,362,843	+				+1.0
2,362,848	+				+2.0
2,362,848	+				+0.2
2,362,848	+				-0.4
2,362,849	-				-2.7
2,362,849	-				-0.9
2,362,849	-				-0.7
2,362,849	-				-0.5
2,362,849	-				+1.1
2,362,859	+				+1.4
2,362,860	-				+0.9
2,362,875	-				+1.4
2,362,875	-				+0.4
2,362,875	-				+0.6
2,362,890	+				+0.4
2,362,891	-				+1.6
2,362,931	+				+0.7
2,362,931	+				+1.3
2,362,931	+				-0.9
2,362,932	-				-0.6
2,362,932	-				-0.1
2,362,932	-				+2.2
2,362,969	-				+2.3
2,363,009	-				-0.4
2,363,021	+				+1.0
2,363,021	+				-0.9
2,363,022	-				+0.3
2,363,022	-				-0.1
2,363,022	-				-0.4
2,363,022	-				-1.8
2,363,022	-				+0.3
2,363,022	-				+0.9
2,363,022	-				+0.3
2,363,025	+				-2.6
2,363,025	+				-0.1
2,363,025	+				+0.7
2,363,025	+				+0.5
2,363,025	+				-1.5
2,363,025	+				-1.0
2,363,025	+				+0.7
2,363,025	+				-1.6
2,363,025	+				+2.2
2,363,026	-				-0.3
2,363,026	-				+1.0
2,363,026	-				+2.8
2,363,026	-				-1.7
2,363,026	-				+0.7
2,363,026	-				-2.2
2,363,026	-				+0.7
2,363,026	-				-1.1
2,363,026	-				-0.5
2,363,039	+				-1.5
2,363,039	+				+1.1
2,363,039	+				+2.5
2,363,040	-				-0.8
2,363,040	-				-0.9
2,363,040	-				-1.9
2,363,040	-				+0.7
2,363,043	+				+0.4
2,363,043	+				+0.2
2,363,043	+				-0.5
2,363,043	+				-2.7
2,363,043	+				-0.3
2,363,043	+				+0.9
2,363,043	+				+1.4
2,363,043	+				+1.2
2,363,043	+				+0.9
2,363,043	+				-2.5
2,363,043	+				-0.7
2,363,043	+				+1.7
2,363,043	+				+1.3
2,363,043	+				-2.5
2,363,043	+				+1.7
2,363,043	+				+0.6
2,363,043	+				-0.3
2,363,043	+				+0.4
2,363,043	+				-2.2
2,363,043	+				-0.9
2,363,043	+				+1.4
2,363,044	-				-1.6
2,363,044	-				+1.0
2,363,044	-				-0.0
2,363,044	-				+1.5
2,363,044	-				-2.2
2,363,044	-				-1.2
2,363,044	-				+1.2
2,363,044	-				+1.1
2,363,044	-				+1.3
2,363,044	-				-1.8
2,363,044	-				+2.4
2,363,044	-				+0.1
2,363,044	-				+2.6
2,363,044	-				+2.4
2,363,044	-				-0.5
2,363,044	-				+0.3
2,363,044	-				-0.6
2,363,044	-				+2.3
2,363,044	-				-1.3
2,363,044	-				+0.4
2,363,044	-				+0.3
2,363,044	-				-0.7
2,363,044	-				+0.4
2,363,044	-				-0.1
2,363,044	-				-1.3
2,363,044	-				+3.2
2,363,044	-				+0.1
2,363,044	-				+0.1
2,363,044	-				+0.5
2,363,044	-				+3.7
2,363,044	-				-1.7
2,363,049	+				-2.3
2,363,049	+				+0.9
2,363,049	+				+0.1
2,363,049	+				-1.1
2,363,049	+				-2.2
2,363,072	+				-0.1
2,363,072	+				+1.9
2,363,072	+				+1.4
2,363,073	-				+0.5
2,363,073	-				-1.3
2,363,074	-				+0.3
2,363,086	+				-1.9
2,363,086	+				+0.1
2,363,087	-				-1.0
2,363,108	+				+1.1
2,363,108	+				+2.3
2,363,108	+				-2.5
2,363,108	+				-1.7
2,363,109	-				+0.9
2,363,109	-				+0.6
2,363,319	+		PFLU_RS10720	0.39	-0.5
2,363,319	+		PFLU_RS10720	0.39	-1.1
2,363,319	+		PFLU_RS10720	0.39	+2.1
2,363,320	-		PFLU_RS10720	0.39	-0.9
2,363,320	-		PFLU_RS10720	0.39	-2.0
2,363,434	-		PFLU_RS10720	0.58	+0.5
2,363,600	+		PFLU_RS10720	0.84	-0.5
2,363,601	-		PFLU_RS10720	0.84	-1.1
2,363,606	+		PFLU_RS10720	0.85	-2.3
2,363,606	+		PFLU_RS10720	0.85	-0.4
2,363,607	-		PFLU_RS10720	0.85	+0.9
2,363,607	-		PFLU_RS10720	0.85	-0.7
2,363,616	+		PFLU_RS10720	0.87	-3.2
2,363,616	+		PFLU_RS10720	0.87	-1.1
2,363,616	+		PFLU_RS10720	0.87	-1.1
2,363,617	-		PFLU_RS10720	0.87	+0.5
2,363,617	-		PFLU_RS10720	0.87	-0.5
2,363,617	-		PFLU_RS10720	0.87	-0.5
2,363,617	-		PFLU_RS10720	0.87	-0.3