Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27300

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
6,075,525	-				+3.6
6,075,525	-				+0.1
6,075,606	-				+2.1
6,075,611	-				+1.3
6,075,612	+				-0.9
6,075,672	+		PFLU_RS31825	0.88	+1.4
6,075,672	+		PFLU_RS31825	0.88	-2.5
6,075,672	+		PFLU_RS31825	0.88	-0.8
6,075,672	+		PFLU_RS31825	0.88	-0.1
6,075,672	+		PFLU_RS31825	0.88	+1.9
6,075,672	+		PFLU_RS31825	0.88	-1.3
6,075,672	+		PFLU_RS31825	0.88	-0.7
6,075,672	+		PFLU_RS31825	0.88	-1.4
6,075,672	+		PFLU_RS31825	0.88	-0.9
6,075,672	+		PFLU_RS31825	0.88	-1.0
6,075,672	+		PFLU_RS31825	0.88	+0.4
6,075,673	-				+0.9
6,075,673	-				-2.0
6,075,673	-				+0.1
6,075,673	-				+0.4
6,075,673	-				-0.8
6,075,673	-				-0.3
6,075,676	+				-1.1
6,075,676	+				+2.0
6,075,676	+				+2.2
6,075,676	+				+0.9
6,075,676	+				-1.4
6,075,676	+				-0.4
6,075,676	+				+0.4
6,075,676	+				+0.9
6,075,676	+				+0.4
6,075,676	+				-1.6
6,075,676	+				-1.3
6,075,676	+				+1.9
6,075,676	+				+0.1
6,075,676	+				-1.7
6,075,676	+				-2.3
6,075,676	+				-0.6
6,075,677	-				-1.6
6,075,677	-				+0.1
6,075,677	-				-0.6
6,075,677	-				-1.0
6,075,677	-				-0.7
6,075,677	-				-0.9
6,075,677	-				-0.9
6,075,677	-				-1.6
6,075,677	-				-1.1
6,075,677	-				-2.4
6,075,677	-				-1.7
6,075,677	-				+0.1
6,075,774	+				+0.6
6,075,774	+				-0.2
6,075,774	+				+0.7
6,075,775	-				+0.3
6,075,792	+				-1.1
6,075,792	+				-0.6
6,075,792	+				-1.1
6,075,792	+				-0.6
6,075,792	+				+0.4
6,075,792	+				-0.7
6,075,792	+				-2.1
6,075,792	+				-0.7
6,075,792	+				-0.4
6,075,793	-				-3.6
6,075,793	-				-0.6
6,075,793	-				-1.7
6,075,793	-				-1.4
6,075,793	-				-2.6
6,075,919	-		PFLU_RS27300	0.17	-2.0
6,075,925	+		PFLU_RS27300	0.17	-0.9
6,075,958	+		PFLU_RS27300	0.20	+0.1
6,075,958	+		PFLU_RS27300	0.20	-2.5
6,075,959	-		PFLU_RS27300	0.20	-1.8
6,075,959	-		PFLU_RS27300	0.20	-1.6
6,075,975	+		PFLU_RS27300	0.21	-2.9
6,075,975	+		PFLU_RS27300	0.21	+0.5
6,075,975	+		PFLU_RS27300	0.21	+0.4
6,075,975	+		PFLU_RS27300	0.21	-0.4
6,075,976	-		PFLU_RS27300	0.21	-2.3
6,075,976	-		PFLU_RS27300	0.21	+0.7
6,075,976	-		PFLU_RS27300	0.21	-1.6
6,076,041	+		PFLU_RS27300	0.26	-0.1
6,076,041	+		PFLU_RS27300	0.26	-1.7
6,076,041	+		PFLU_RS27300	0.26	+1.3
6,076,084	-		PFLU_RS27300	0.29	-0.7
6,076,084	-		PFLU_RS27300	0.29	-3.2
6,076,219	+		PFLU_RS27300	0.38	-0.1
6,076,220	-		PFLU_RS27300	0.38	-0.1
6,076,280	+		PFLU_RS27300	0.42	-2.5
6,076,281	-		PFLU_RS27300	0.43	-3.2
6,076,281	-		PFLU_RS27300	0.43	+0.4
6,076,281	-		PFLU_RS27300	0.43	-2.1
6,076,284	+		PFLU_RS27300	0.43	+0.1
6,076,284	+		PFLU_RS27300	0.43	-0.8
6,076,284	+		PFLU_RS27300	0.43	-2.1
6,076,284	+		PFLU_RS27300	0.43	+0.9
6,076,284	+		PFLU_RS27300	0.43	+0.1
6,076,284	+		PFLU_RS27300	0.43	+0.4
6,076,284	+		PFLU_RS27300	0.43	-0.1
6,076,284	+		PFLU_RS27300	0.43	-2.3
6,076,284	+		PFLU_RS27300	0.43	-0.8
6,076,284	+		PFLU_RS27300	0.43	-0.6
6,076,284	+		PFLU_RS27300	0.43	-3.3
6,076,284	+		PFLU_RS27300	0.43	-2.1
6,076,284	+		PFLU_RS27300	0.43	-0.1
6,076,284	+		PFLU_RS27300	0.43	+0.9
6,076,284	+		PFLU_RS27300	0.43	-3.0
6,076,284	+		PFLU_RS27300	0.43	-3.4
6,076,284	+		PFLU_RS27300	0.43	-0.4
6,076,285	-		PFLU_RS27300	0.43	-1.8
6,076,285	-		PFLU_RS27300	0.43	-1.3
6,076,285	-		PFLU_RS27300	0.43	-0.4
6,076,285	-		PFLU_RS27300	0.43	-1.0
6,076,285	-		PFLU_RS27300	0.43	-2.7
6,076,285	-		PFLU_RS27300	0.43	-1.9
6,076,285	-		PFLU_RS27300	0.43	-1.0
6,076,285	-		PFLU_RS27300	0.43	-2.8
6,076,285	-		PFLU_RS27300	0.43	-1.0
6,076,285	-		PFLU_RS27300	0.43	-2.3
6,076,285	-		PFLU_RS27300	0.43	-0.7
6,076,285	-		PFLU_RS27300	0.43	-1.1
6,076,285	-		PFLU_RS27300	0.43	-0.7
6,076,285	-		PFLU_RS27300	0.43	-0.9
6,076,285	-		PFLU_RS27300	0.43	-1.8
6,076,285	-		PFLU_RS27300	0.43	-1.3
6,076,285	-		PFLU_RS27300	0.43	-0.7
6,076,285	-		PFLU_RS27300	0.43	-2.6
6,076,285	-		PFLU_RS27300	0.43	+1.3
6,076,285	-		PFLU_RS27300	0.43	-0.5
6,076,285	-		PFLU_RS27300	0.43	-1.5
6,076,285	-		PFLU_RS27300	0.43	-1.6
6,076,285	-		PFLU_RS27300	0.43	-2.2
6,076,285	-		PFLU_RS27300	0.43	-0.6
6,076,293	+		PFLU_RS27300	0.43	-1.6
6,076,293	+		PFLU_RS27300	0.43	-1.3
6,076,294	-		PFLU_RS27300	0.43	+0.1
6,076,294	-		PFLU_RS27300	0.43	-0.1
6,076,294	-		PFLU_RS27300	0.43	+0.4
6,076,345	+		PFLU_RS27300	0.47	-1.0
6,076,345	+		PFLU_RS27300	0.47	-0.6
6,076,345	+		PFLU_RS27300	0.47	-1.9
6,076,346	-		PFLU_RS27300	0.47	-0.9
6,076,346	-		PFLU_RS27300	0.47	-1.5
6,076,346	-		PFLU_RS27300	0.47	+2.1
6,076,346	-		PFLU_RS27300	0.47	+0.0
6,076,430	+		PFLU_RS27300	0.53	-1.1
6,076,430	+		PFLU_RS27300	0.53	-1.8
6,076,430	+		PFLU_RS27300	0.53	+0.1
6,076,430	+		PFLU_RS27300	0.53	+0.1
6,076,430	+		PFLU_RS27300	0.53	-0.0
6,076,430	+		PFLU_RS27300	0.53	+0.1
6,076,430	+		PFLU_RS27300	0.53	-1.4
6,076,430	+		PFLU_RS27300	0.53	+0.9
6,076,430	+		PFLU_RS27300	0.53	-0.6
6,076,430	+		PFLU_RS27300	0.53	-1.5
6,076,430	+		PFLU_RS27300	0.53	-1.4
6,076,430	+		PFLU_RS27300	0.53	-2.0
6,076,430	+		PFLU_RS27300	0.53	-2.0
6,076,430	+		PFLU_RS27300	0.53	-2.1
6,076,430	+		PFLU_RS27300	0.53	-2.6
6,076,431	-		PFLU_RS27300	0.53	-0.8
6,076,431	-		PFLU_RS27300	0.53	+1.4
6,076,431	-		PFLU_RS27300	0.53	-0.4
6,076,431	-		PFLU_RS27300	0.53	-0.8
6,076,431	-		PFLU_RS27300	0.53	-2.2
6,076,431	-		PFLU_RS27300	0.53	-3.5
6,076,431	-		PFLU_RS27300	0.53	-0.8
6,076,431	-		PFLU_RS27300	0.53	-2.8
6,076,431	-		PFLU_RS27300	0.53	-2.3
6,076,431	-		PFLU_RS27300	0.53	-2.8
6,076,431	-		PFLU_RS27300	0.53	-0.7
6,076,431	-		PFLU_RS27300	0.53	+0.2
6,076,431	-		PFLU_RS27300	0.53	-1.9
6,076,474	+		PFLU_RS27300	0.56	-0.1
6,076,474	+		PFLU_RS27300	0.56	-2.0
6,076,474	+		PFLU_RS27300	0.56	-0.4
6,076,474	+		PFLU_RS27300	0.56	-0.9
6,076,474	+		PFLU_RS27300	0.56	-2.0
6,076,475	-		PFLU_RS27300	0.56	-3.3
6,076,475	-		PFLU_RS27300	0.56	+0.5
6,076,475	-		PFLU_RS27300	0.56	+0.6
6,076,475	-		PFLU_RS27300	0.56	+0.1
6,076,493	-		PFLU_RS27300	0.58	-2.1
6,076,493	-		PFLU_RS27300	0.58	-1.1
6,076,493	-		PFLU_RS27300	0.58	-2.3
6,076,511	+		PFLU_RS27300	0.59	+2.7
6,076,511	+		PFLU_RS27300	0.59	-1.2
6,076,511	+		PFLU_RS27300	0.59	-2.1
6,076,512	-		PFLU_RS27300	0.59	-1.9
6,076,512	-		PFLU_RS27300	0.59	-2.2
6,076,526	+		PFLU_RS27300	0.60	-2.5
6,076,553	+		PFLU_RS27300	0.62	-2.0
6,076,553	+		PFLU_RS27300	0.62	+1.9
6,076,553	+		PFLU_RS27300	0.62	-1.5
6,076,553	+		PFLU_RS27300	0.62	+0.4
6,076,553	+		PFLU_RS27300	0.62	-2.2
6,076,553	+		PFLU_RS27300	0.62	+0.4
6,076,553	+		PFLU_RS27300	0.62	-1.8
6,076,553	+		PFLU_RS27300	0.62	-2.4
6,076,554	-		PFLU_RS27300	0.62	-1.3
6,076,554	-		PFLU_RS27300	0.62	-0.4
6,076,554	-		PFLU_RS27300	0.62	+1.1
6,076,554	-		PFLU_RS27300	0.62	-2.8
6,076,554	-		PFLU_RS27300	0.62	+1.8
6,076,554	-		PFLU_RS27300	0.62	-1.5
6,076,554	-		PFLU_RS27300	0.62	-0.7
6,076,554	-		PFLU_RS27300	0.62	-0.1
6,076,554	-		PFLU_RS27300	0.62	+1.0
6,076,556	+		PFLU_RS27300	0.62	+1.8
6,076,556	+		PFLU_RS27300	0.62	+0.1
6,076,556	+		PFLU_RS27300	0.62	-0.4
6,076,556	+		PFLU_RS27300	0.62	-1.0
6,076,556	+		PFLU_RS27300	0.62	-1.1
6,076,556	+		PFLU_RS27300	0.62	-1.6
6,076,556	+		PFLU_RS27300	0.62	-0.9
6,076,556	+		PFLU_RS27300	0.62	+0.1
6,076,556	+		PFLU_RS27300	0.62	-2.4
6,076,556	+		PFLU_RS27300	0.62	-0.9
6,076,556	+		PFLU_RS27300	0.62	-2.4
6,076,557	-		PFLU_RS27300	0.62	-0.7
6,076,557	-		PFLU_RS27300	0.62	-1.6
6,076,557	-		PFLU_RS27300	0.62	-0.6
6,076,557	-		PFLU_RS27300	0.62	-1.2
6,076,557	-		PFLU_RS27300	0.62	-0.6
6,076,557	-		PFLU_RS27300	0.62	-2.5
6,076,557	-		PFLU_RS27300	0.62	-0.6
6,076,557	-		PFLU_RS27300	0.62	+0.1
6,076,557	-		PFLU_RS27300	0.62	-1.7
6,076,573	+		PFLU_RS27300	0.63	-3.1
6,076,573	+		PFLU_RS27300	0.63	-0.2
6,076,573	+		PFLU_RS27300	0.63	-1.6
6,076,574	-		PFLU_RS27300	0.63	-0.9
6,076,574	-		PFLU_RS27300	0.63	-4.2
6,076,574	-		PFLU_RS27300	0.63	-0.1
6,076,574	-		PFLU_RS27300	0.63	-1.2
6,076,574	-		PFLU_RS27300	0.63	-0.2
6,076,621	+		PFLU_RS27300	0.67	-0.9
6,076,621	+		PFLU_RS27300	0.67	-0.6
6,076,621	+		PFLU_RS27300	0.67	-0.6
6,076,621	+		PFLU_RS27300	0.67	-2.7
6,076,622	-		PFLU_RS27300	0.67	-1.8
6,076,622	-		PFLU_RS27300	0.67	-1.8
6,076,622	-		PFLU_RS27300	0.67	-2.1
6,076,691	+		PFLU_RS27300	0.71	-2.4
6,076,691	+		PFLU_RS27300	0.71	-0.9
6,076,691	+		PFLU_RS27300	0.71	-0.9
6,076,691	+		PFLU_RS27300	0.71	-1.0
6,076,692	-		PFLU_RS27300	0.72	-0.9
6,076,735	+		PFLU_RS27300	0.75	-0.1
6,076,735	+		PFLU_RS27300	0.75	-1.6
6,076,736	-		PFLU_RS27300	0.75	-2.3
6,076,736	-		PFLU_RS27300	0.75	+1.4
6,076,736	-		PFLU_RS27300	0.75	-0.1
6,076,743	+		PFLU_RS27300	0.75	-0.9
6,076,743	+		PFLU_RS27300	0.75	-1.9
6,076,744	-		PFLU_RS27300	0.75	-1.9
6,076,766	+		PFLU_RS27300	0.77	+0.2
6,076,771	+		PFLU_RS27300	0.77	-1.3
6,076,771	+		PFLU_RS27300	0.77	+0.9
6,076,771	+		PFLU_RS27300	0.77	-0.9
6,076,771	+		PFLU_RS27300	0.77	-1.3
6,076,772	-		PFLU_RS27300	0.77	-0.8
6,076,775	-		PFLU_RS27300	0.77	-2.4
6,076,775	-		PFLU_RS27300	0.77	+1.4
6,076,775	-		PFLU_RS27300	0.77	-2.6
6,076,775	-		PFLU_RS27300	0.77	+1.9
6,076,775	-		PFLU_RS27300	0.77	+0.9
6,076,802	+		PFLU_RS27300	0.79	-0.1
6,076,802	+		PFLU_RS27300	0.79	-2.0
6,076,802	+		PFLU_RS27300	0.79	+0.6
6,076,802	+		PFLU_RS27300	0.79	-2.3
6,076,802	+		PFLU_RS27300	0.79	-0.3
6,076,802	+		PFLU_RS27300	0.79	+0.9
6,076,802	+		PFLU_RS27300	0.79	-2.9
6,076,802	+		PFLU_RS27300	0.79	-2.4
6,076,802	+		PFLU_RS27300	0.79	-2.0
6,076,803	-		PFLU_RS27300	0.79	+0.3
6,076,803	-		PFLU_RS27300	0.79	-0.0
6,076,803	-		PFLU_RS27300	0.79	-2.1
6,076,803	-		PFLU_RS27300	0.79	-1.1
6,076,803	-		PFLU_RS27300	0.79	-1.6
6,076,814	+		PFLU_RS27300	0.80	-1.4
6,076,815	-		PFLU_RS27300	0.80	-2.5
6,076,815	-		PFLU_RS27300	0.80	-1.2
6,076,815	-		PFLU_RS27300	0.80	-3.3
6,076,815	-		PFLU_RS27300	0.80	-0.9
6,076,886	+		PFLU_RS27300	0.85	-2.2
6,076,887	-		PFLU_RS27300	0.85	-2.5
6,077,093	+				-0.3
6,077,098	+				-0.3
6,077,098	+				+1.1
6,077,098	+				+1.0
6,077,098	+				+0.6
6,077,098	+				+2.2
6,077,098	+				+0.7
6,077,098	+				+0.2
6,077,098	+				-1.0
6,077,098	+				+1.4
6,077,098	+				+0.6
6,077,098	+				+1.1
6,077,098	+				+0.3
6,077,098	+				+2.3
6,077,098	+				+0.3
6,077,098	+				-2.5
6,077,099	-				-0.2
6,077,099	-				+1.1
6,077,099	-				-0.7
6,077,099	-				+0.6
6,077,099	-				+1.3
6,077,099	-				-1.6
6,077,099	-				-2.6
6,077,099	-				+0.8
6,077,099	-				+0.7
6,077,099	-				+0.2
6,077,099	-				-0.1
6,077,099	-				+1.6
6,077,099	-				+1.4
6,077,099	-				+0.4
6,077,099	-				-1.3
6,077,099	-				-1.8
6,077,099	-				-0.6
6,077,099	-				+2.4
6,077,108	+				+1.7
6,077,108	+				+3.1
6,077,108	+				-1.6
6,077,108	+				+0.4
6,077,108	+				-2.7
6,077,108	+				-1.3
6,077,108	+				+0.1
6,077,108	+				+1.7
6,077,108	+				+1.4
6,077,108	+				+1.6
6,077,108	+				-0.3
6,077,108	+				+1.2
6,077,108	+				+0.3
6,077,108	+				-0.6
6,077,108	+				-1.4
6,077,108	+				+1.4
6,077,108	+				+0.3
6,077,108	+				-1.0
6,077,108	+				-1.0
6,077,108	+				+0.7
6,077,108	+				-1.8
6,077,108	+				+0.8
6,077,108	+				+1.0
6,077,109	-				+1.2
6,077,109	-				-1.3
6,077,109	-				+1.3
6,077,109	-				+2.2
6,077,109	-				-3.4
6,077,109	-				-1.9
6,077,109	-				+1.2
6,077,109	-				-0.6
6,077,109	-				-1.3
6,077,109	-				-0.5
6,077,109	-				+0.1
6,077,109	-				-0.5
6,077,109	-				-1.8
6,077,109	-				+1.3
6,077,109	-				-0.9
6,077,109	-				+1.4
6,077,109	-				+0.4
6,077,109	-				+0.7
6,077,109	-				+1.1
6,077,109	-				+0.0
6,077,109	-				-1.4
6,077,110	+				+2.2
6,077,110	+				-1.4
6,077,110	+				+0.9
6,077,110	+				-0.1
6,077,110	+				+0.6
6,077,110	+				-0.1
6,077,110	+				-1.0
6,077,110	+				-2.7
6,077,110	+				-1.0
6,077,110	+				-2.1
6,077,110	+				-0.0
6,077,111	-				+0.9
6,077,111	-				+1.4
6,077,111	-				-2.0
6,077,111	-				-0.3
6,077,111	-				+1.1
6,077,111	-				-0.2
6,077,111	-				-0.8
6,077,111	-				-0.6
6,077,111	-				+0.9
6,077,111	-				+0.5
6,077,112	+				+1.3
6,077,112	+				+1.5
6,077,112	+				+0.6
6,077,112	+				-2.1
6,077,112	+				-0.4
6,077,112	+				-1.4
6,077,112	+				-1.8
6,077,112	+				-1.3
6,077,112	+				-0.7
6,077,112	+				+0.9
6,077,113	-				-1.2
6,077,113	-				+1.7
6,077,113	-				-1.0
6,077,113	-				-2.1
6,077,113	-				-2.1
6,077,113	-				+0.9
6,077,113	-				+0.4
6,077,113	-				+0.5
6,077,113	-				+0.3
6,077,113	-				-1.0
6,077,113	-				+1.2
6,077,113	-				-0.8
6,077,113	-				+1.5
6,077,113	-				-0.6
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6,077,113	-				-1.3
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6,077,199	-				+1.0
6,077,199	-				-2.6
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6,077,199	-				-1.0
6,077,199	-				+0.3
6,077,199	-				+1.4
6,077,328	+		PFLU_RS27305	0.21	-0.4
6,077,328	+		PFLU_RS27305	0.21	+1.3
6,077,328	+		PFLU_RS27305	0.21	-1.1
6,077,328	+		PFLU_RS27305	0.21	-0.1
6,077,329	-		PFLU_RS27305	0.21	+1.3
6,077,329	-		PFLU_RS27305	0.21	-2.1
6,077,329	-		PFLU_RS27305	0.21	+1.4
6,077,329	-		PFLU_RS27305	0.21	-0.4
6,077,577	+		PFLU_RS27305	0.44	-0.9
6,077,578	-		PFLU_RS27305	0.44	-1.0
6,077,632	-		PFLU_RS27305	0.49	-0.8
6,078,018	+		PFLU_RS27305	0.84	+1.0
6,078,018	+		PFLU_RS27305	0.84	-0.1
6,078,050	+		PFLU_RS27305	0.87	+0.8
6,078,050	+		PFLU_RS27305	0.87	-0.7
6,078,050	+		PFLU_RS27305	0.87	+0.6
6,078,051	-		PFLU_RS27305	0.87	-1.0
6,078,051	-		PFLU_RS27305	0.87	-1.9
6,078,051	-		PFLU_RS27305	0.87	-0.1
6,078,051	-		PFLU_RS27305	0.87	+0.1
6,078,051	-		PFLU_RS27305	0.87	+2.0
6,078,051	-		PFLU_RS27305	0.87	+0.1
6,078,057	+		PFLU_RS27305	0.88	-2.7
6,078,057	+		PFLU_RS27305	0.88	+0.3
6,078,057	+		PFLU_RS27305	0.88	+0.2
6,078,057	+		PFLU_RS27305	0.88	+1.1
6,078,057	+		PFLU_RS27305	0.88	+1.7
6,078,057	+		PFLU_RS27305	0.88	+0.4
6,078,058	-		PFLU_RS27305	0.88	+0.3
6,078,058	-		PFLU_RS27305	0.88	-0.9
6,078,058	-		PFLU_RS27305	0.88	+1.0
6,078,058	-		PFLU_RS27305	0.88	-0.5
6,078,058	-		PFLU_RS27305	0.88	-0.9