Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26205

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
5,860,240	+		PFLU_RS26200	0.13	-0.1
5,860,240	+		PFLU_RS26200	0.13	-1.6
5,860,240	+		PFLU_RS26200	0.13	-1.7
5,860,240	+		PFLU_RS26200	0.13	-1.5
5,860,240	+		PFLU_RS26200	0.13	-2.6
5,860,241	-		PFLU_RS26200	0.13	+1.7
5,860,247	+		PFLU_RS26200	0.14	-1.6
5,860,247	+		PFLU_RS26200	0.14	-0.1
5,860,247	+		PFLU_RS26200	0.14	+0.9
5,860,247	+		PFLU_RS26200	0.14	-2.8
5,860,247	+		PFLU_RS26200	0.14	+0.9
5,860,247	+		PFLU_RS26200	0.14	-1.3
5,860,248	-		PFLU_RS26200	0.14	+1.9
5,860,248	-		PFLU_RS26200	0.14	-0.9
5,860,248	-		PFLU_RS26200	0.14	-1.9
5,860,248	-		PFLU_RS26200	0.14	-1.5
5,860,248	-		PFLU_RS26200	0.14	-2.3
5,860,248	-		PFLU_RS26200	0.14	+0.4
5,860,248	-		PFLU_RS26200	0.14	-1.1
5,860,248	-		PFLU_RS26200	0.14	-1.3
5,860,248	-		PFLU_RS26200	0.14	-1.8
5,860,248	-		PFLU_RS26200	0.14	+0.2
5,860,306	+		PFLU_RS26200	0.20	-0.7
5,860,306	+		PFLU_RS26200	0.20	-2.3
5,860,306	+		PFLU_RS26200	0.20	-1.3
5,860,307	-		PFLU_RS26200	0.20	-1.0
5,860,307	-		PFLU_RS26200	0.20	-2.0
5,860,307	-		PFLU_RS26200	0.20	-0.9
5,860,307	-		PFLU_RS26200	0.20	-2.5
5,860,307	-		PFLU_RS26200	0.20	-0.2
5,860,409	+		PFLU_RS26200	0.31	+0.2
5,860,410	-		PFLU_RS26200	0.31	-0.6
5,860,410	-		PFLU_RS26200	0.31	-0.6
5,860,711	+		PFLU_RS26200	0.62	-2.5
5,860,711	+		PFLU_RS26200	0.62	-1.4
5,860,712	-		PFLU_RS26200	0.62	+1.3
5,860,712	-		PFLU_RS26200	0.62	-1.1
5,860,712	-		PFLU_RS26200	0.62	+0.9
5,860,712	-		PFLU_RS26200	0.62	-0.1
5,860,712	-		PFLU_RS26200	0.62	-2.9
5,860,712	-		PFLU_RS26200	0.62	-0.6
5,860,712	-		PFLU_RS26200	0.62	+1.0
5,860,840	+		PFLU_RS26200	0.75	-2.7
5,860,840	+		PFLU_RS26200	0.75	-3.1
5,860,840	+		PFLU_RS26200	0.75	-0.7
5,860,841	-		PFLU_RS26200	0.76	-1.5
5,860,841	-		PFLU_RS26200	0.76	-2.3
5,860,979	+		PFLU_RS26200	0.90	-2.9
5,860,980	-				-2.4
5,861,056	-				-1.8
5,861,056	-				-0.9
5,861,056	-				+0.3
5,861,078	+				-2.0
5,861,079	-				-1.4
5,861,079	-				-1.9
5,861,079	-				-1.3
5,861,079	-				-0.1
5,861,079	-				-1.8
5,861,079	-				-0.6
5,861,079	-				-0.1
5,861,096	-				+1.0
5,861,151	+				-2.7
5,861,151	+				-1.8
5,861,151	+				-1.5
5,861,151	+				+0.7
5,861,151	+				+2.1
5,861,151	+				-1.0
5,861,151	+				-0.7
5,861,151	+				-1.9
5,861,151	+				-1.1
5,861,151	+				+0.1
5,861,151	+				-0.4
5,861,151	+				-2.6
5,861,151	+				+0.4
5,861,151	+				-2.0
5,861,151	+				+0.1
5,861,151	+				-1.7
5,861,151	+				-0.4
5,861,151	+				-2.4
5,861,151	+				-0.4
5,861,151	+				-2.1
5,861,151	+				-1.7
5,861,152	-				+1.4
5,861,152	-				-0.4
5,861,152	-				+1.1
5,861,152	-				+0.3
5,861,152	-				+1.4
5,861,152	-				-1.1
5,861,152	-				-1.8
5,861,152	-				+1.3
5,861,152	-				-0.7
5,861,152	-				+0.7
5,861,152	-				+1.6
5,861,152	-				+1.0
5,861,291	+		PFLU_RS26205	0.34	-2.9
5,861,291	+		PFLU_RS26205	0.34	+0.4
5,861,291	+		PFLU_RS26205	0.34	-1.3
5,861,291	+		PFLU_RS26205	0.34	-2.1
5,861,291	+		PFLU_RS26205	0.34	-2.1
5,861,291	+		PFLU_RS26205	0.34	-0.9
5,861,291	+		PFLU_RS26205	0.34	+1.2
5,861,291	+		PFLU_RS26205	0.34	-0.7
5,861,291	+		PFLU_RS26205	0.34	-2.3
5,861,291	+		PFLU_RS26205	0.34	-1.6
5,861,291	+		PFLU_RS26205	0.34	-1.8
5,861,291	+		PFLU_RS26205	0.34	-2.5
5,861,292	-		PFLU_RS26205	0.34	+2.1
5,861,292	-		PFLU_RS26205	0.34	-2.6
5,861,292	-		PFLU_RS26205	0.34	-1.7
5,861,292	-		PFLU_RS26205	0.34	-3.5
5,861,292	-		PFLU_RS26205	0.34	-2.6
5,861,292	-		PFLU_RS26205	0.34	-2.4
5,861,292	-		PFLU_RS26205	0.34	-0.5
5,861,292	-		PFLU_RS26205	0.34	-1.0
5,861,292	-		PFLU_RS26205	0.34	-1.5
5,861,292	-		PFLU_RS26205	0.34	-2.9
5,861,292	-		PFLU_RS26205	0.34	-2.6
5,861,292	-		PFLU_RS26205	0.34	-1.7
5,861,328	+		PFLU_RS26205	0.53	-1.2
5,861,328	+		PFLU_RS26205	0.53	-2.2
5,861,328	+		PFLU_RS26205	0.53	-1.3
5,861,328	+		PFLU_RS26205	0.53	-2.3
5,861,328	+		PFLU_RS26205	0.53	-1.7
5,861,328	+		PFLU_RS26205	0.53	-3.2
5,861,328	+		PFLU_RS26205	0.53	-0.7
5,861,329	-		PFLU_RS26205	0.53	-2.8
5,861,329	-		PFLU_RS26205	0.53	-0.9
5,861,329	-		PFLU_RS26205	0.53	-0.7
5,861,329	-		PFLU_RS26205	0.53	+0.4
5,861,329	-		PFLU_RS26205	0.53	-1.4
5,861,329	-		PFLU_RS26205	0.53	-2.1
5,861,329	-		PFLU_RS26205	0.53	+1.9
5,861,329	-		PFLU_RS26205	0.53	-1.1
5,861,339	+		PFLU_RS26205	0.58	-1.7
5,861,339	+		PFLU_RS26205	0.58	+0.3
5,861,339	+		PFLU_RS26205	0.58	-1.3
5,861,339	+		PFLU_RS26205	0.58	-3.9
5,861,339	+		PFLU_RS26205	0.58	+0.7
5,861,339	+		PFLU_RS26205	0.58	-1.9
5,861,339	+		PFLU_RS26205	0.58	-2.3
5,861,339	+		PFLU_RS26205	0.58	+0.1
5,861,339	+		PFLU_RS26205	0.58	-3.0
5,861,339	+		PFLU_RS26205	0.58	-1.6
5,861,340	-		PFLU_RS26205	0.59	-3.2
5,861,340	-		PFLU_RS26205	0.59	-2.1
5,861,340	-		PFLU_RS26205	0.59	-2.1
5,861,340	-		PFLU_RS26205	0.59	-2.9
5,861,340	-		PFLU_RS26205	0.59	-2.7
5,861,340	-		PFLU_RS26205	0.59	-1.9
5,861,340	-		PFLU_RS26205	0.59	-2.1
5,861,340	-		PFLU_RS26205	0.59	+0.1
5,861,340	-		PFLU_RS26205	0.59	-2.3
5,861,348	+		PFLU_RS26205	0.63	-2.8
5,861,349	-		PFLU_RS26205	0.63	-1.6
5,861,390	+		PFLU_RS26205	0.84	-1.1
5,861,390	+		PFLU_RS26205	0.84	-1.6
5,861,390	+		PFLU_RS26205	0.84	-2.2
5,861,391	-		PFLU_RS26205	0.84	-0.9
5,861,391	-		PFLU_RS26205	0.84	-2.8
5,861,391	-		PFLU_RS26205	0.84	-1.3
5,861,394	+		PFLU_RS26205	0.86	-2.4
5,861,394	+		PFLU_RS26205	0.86	-1.8
5,861,395	-		PFLU_RS26205	0.86	-3.1
5,861,478	+				-1.8
5,861,479	-				-0.1
5,861,522	+				-1.1
5,861,522	+				-2.6
5,861,522	+				-2.3
5,861,522	+				-1.3
5,861,522	+				-2.1
5,861,523	-				-1.6
5,861,523	-				-0.9
5,861,523	-				-2.7
5,861,523	-				-0.9
5,861,523	-				+0.7
5,861,523	-				-2.9
5,861,523	-				-0.4
5,861,523	-				-2.7
5,861,523	-				-1.7
5,861,523	-				-1.4
5,861,523	-				-1.6
5,861,523	-				-2.0
5,861,523	-				-1.7
5,861,523	-				-1.0
5,861,523	-				-2.6
5,861,523	-				+0.4
5,861,523	-				-2.4
5,861,523	-				-2.4
5,861,523	-				-1.6
5,861,579	+				-2.6
5,861,579	+				-2.0
5,861,579	+				-2.1
5,861,580	-				-0.7
5,861,580	-				-1.1
5,861,580	-				-2.6
5,861,580	-				-0.5
5,861,580	-				-2.3
5,861,580	-				-0.2
5,861,580	-				-2.8
5,861,660	+		PFLU_RS26210	0.11	+0.4
5,861,660	+		PFLU_RS26210	0.11	+0.1
5,861,660	+		PFLU_RS26210	0.11	-1.4
5,861,660	+		PFLU_RS26210	0.11	-2.2
5,861,660	+		PFLU_RS26210	0.11	-1.6
5,861,661	-		PFLU_RS26210	0.11	-0.7
5,861,661	-		PFLU_RS26210	0.11	-2.1
5,861,661	-		PFLU_RS26210	0.11	-2.0
5,861,661	-		PFLU_RS26210	0.11	-2.2
5,861,661	-		PFLU_RS26210	0.11	-1.1
5,861,661	-		PFLU_RS26210	0.11	+0.1
5,861,661	-		PFLU_RS26210	0.11	-1.4
5,861,661	-		PFLU_RS26210	0.11	-1.6
5,861,715	+		PFLU_RS26210	0.13	-1.5
5,861,715	+		PFLU_RS26210	0.13	-1.6
5,861,715	+		PFLU_RS26210	0.13	-2.5
5,861,716	-		PFLU_RS26210	0.13	+0.1
5,861,777	+		PFLU_RS26210	0.16	-2.5
5,861,777	+		PFLU_RS26210	0.16	-1.4
5,861,777	+		PFLU_RS26210	0.16	-2.5
5,861,777	+		PFLU_RS26210	0.16	-2.2
5,861,777	+		PFLU_RS26210	0.16	-2.1
5,861,777	+		PFLU_RS26210	0.16	-2.3
5,861,777	+		PFLU_RS26210	0.16	-2.8
5,861,777	+		PFLU_RS26210	0.16	+0.1
5,861,777	+		PFLU_RS26210	0.16	+0.4
5,861,777	+		PFLU_RS26210	0.16	-2.4
5,861,778	-		PFLU_RS26210	0.16	-1.6
5,861,778	-		PFLU_RS26210	0.16	-1.4
5,861,778	-		PFLU_RS26210	0.16	-1.9
5,861,778	-		PFLU_RS26210	0.16	-1.8
5,861,778	-		PFLU_RS26210	0.16	-1.1
5,861,778	-		PFLU_RS26210	0.16	-1.1
5,861,778	-		PFLU_RS26210	0.16	-2.4
5,861,778	-		PFLU_RS26210	0.16	-1.8
5,861,778	-		PFLU_RS26210	0.16	-2.4
5,861,909	+		PFLU_RS26210	0.23	-1.1
5,861,909	+		PFLU_RS26210	0.23	-3.2
5,861,909	+		PFLU_RS26210	0.23	-2.8
5,861,909	+		PFLU_RS26210	0.23	-1.3
5,861,909	+		PFLU_RS26210	0.23	-2.0
5,861,910	-		PFLU_RS26210	0.23	-0.4
5,861,910	-		PFLU_RS26210	0.23	-1.7
5,861,910	-		PFLU_RS26210	0.23	-3.6
5,861,910	-		PFLU_RS26210	0.23	+0.1
5,861,918	+		PFLU_RS26210	0.23	-1.1
5,862,127	+		PFLU_RS26210	0.33	-1.5
5,862,127	+		PFLU_RS26210	0.33	-0.7
5,862,128	-		PFLU_RS26210	0.33	+1.9
5,862,151	-		PFLU_RS26210	0.35	-1.4
5,862,151	-		PFLU_RS26210	0.35	-3.0
5,862,154	+		PFLU_RS26210	0.35	-0.7
5,862,154	+		PFLU_RS26210	0.35	-1.8
5,862,154	+		PFLU_RS26210	0.35	-1.9
5,862,154	+		PFLU_RS26210	0.35	-2.9
5,862,154	+		PFLU_RS26210	0.35	-0.6
5,862,154	+		PFLU_RS26210	0.35	-2.1
5,862,155	-		PFLU_RS26210	0.35	+0.9
5,862,240	+		PFLU_RS26210	0.39	-0.6
5,862,241	-		PFLU_RS26210	0.39	-1.5
5,862,301	-		PFLU_RS26210	0.42	-0.9
5,862,301	-		PFLU_RS26210	0.42	+2.4
5,862,326	+		PFLU_RS26210	0.43	-3.1
5,862,326	+		PFLU_RS26210	0.43	-1.8
5,862,326	+		PFLU_RS26210	0.43	-2.1
5,862,326	+		PFLU_RS26210	0.43	-2.3
5,862,327	-		PFLU_RS26210	0.43	-0.6
5,862,410	+		PFLU_RS26210	0.47	-0.7
5,862,410	+		PFLU_RS26210	0.47	-1.0
5,862,410	+		PFLU_RS26210	0.47	-0.6
5,862,410	+		PFLU_RS26210	0.47	+0.4
5,862,411	-		PFLU_RS26210	0.47	-2.0
5,862,411	-		PFLU_RS26210	0.47	-2.2