Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00245

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
48,273	+		PFLU_RS00240	0.52	-0.2
48,273	+		PFLU_RS00240	0.52	+0.3
48,273	+		PFLU_RS00240	0.52	+1.6
48,273	+		PFLU_RS00240	0.52	-1.2
48,274	-		PFLU_RS00240	0.52	-2.5
48,274	-		PFLU_RS00240	0.52	+1.0
48,274	-		PFLU_RS00240	0.52	-2.3
48,327	+		PFLU_RS00240	0.55	-1.2
48,328	-		PFLU_RS00240	0.55	-2.7
48,328	-		PFLU_RS00240	0.55	-0.7
48,438	+		PFLU_RS00240	0.60	-1.5
48,438	+		PFLU_RS00240	0.60	-0.0
48,438	+		PFLU_RS00240	0.60	-1.6
48,439	-		PFLU_RS00240	0.60	-1.3
48,439	-		PFLU_RS00240	0.60	-0.1
48,769	-		PFLU_RS00240	0.76	-0.5
48,769	-		PFLU_RS00240	0.76	-1.9
48,949	+		PFLU_RS00240	0.85	-0.1
48,949	+		PFLU_RS00240	0.85	-1.2
48,950	-		PFLU_RS00240	0.85	-1.2
48,972	+		PFLU_RS00240	0.86	+1.5
48,973	-		PFLU_RS00240	0.86	+0.9
48,973	-		PFLU_RS00240	0.86	+0.2
48,973	-		PFLU_RS00240	0.86	-2.5
48,973	-		PFLU_RS00240	0.86	-1.3
48,973	-		PFLU_RS00240	0.86	+0.5
48,973	-		PFLU_RS00240	0.86	-0.3
48,987	-		PFLU_RS00240	0.87	-2.4
49,001	+		PFLU_RS00240	0.88	+0.7
49,001	+		PFLU_RS00240	0.88	+0.5
49,002	-		PFLU_RS00240	0.88	-1.5
49,002	-		PFLU_RS00240	0.88	+2.5
49,002	-		PFLU_RS00240	0.88	+1.5
49,002	-		PFLU_RS00240	0.88	+0.8
49,017	+		PFLU_RS00240	0.88	-1.0
49,018	-		PFLU_RS00240	0.88	+0.1
49,029	+		PFLU_RS00240	0.89	-0.1
49,029	+		PFLU_RS00240	0.89	-1.0
49,030	-		PFLU_RS00240	0.89	-1.7
49,032	+		PFLU_RS00240	0.89	+0.5
49,032	+		PFLU_RS00240	0.89	-1.0
49,032	+		PFLU_RS00240	0.89	+0.8
49,032	+		PFLU_RS00240	0.89	+0.7
49,032	+		PFLU_RS00240	0.89	-1.8
49,032	+		PFLU_RS00240	0.89	+0.1
49,032	+		PFLU_RS00240	0.89	+0.9
49,032	+		PFLU_RS00240	0.89	+0.2
49,032	+		PFLU_RS00240	0.89	+1.7
49,032	+		PFLU_RS00240	0.89	+1.0
49,032	+		PFLU_RS00240	0.89	+0.7
49,032	+		PFLU_RS00240	0.89	-2.0
49,032	+		PFLU_RS00240	0.89	+1.6
49,032	+		PFLU_RS00240	0.89	-1.4
49,032	+		PFLU_RS00240	0.89	+0.8
49,032	+		PFLU_RS00240	0.89	+1.5
49,033	-		PFLU_RS00240	0.89	-1.4
49,033	-		PFLU_RS00240	0.89	+0.9
49,033	-		PFLU_RS00240	0.89	+0.2
49,033	-		PFLU_RS00240	0.89	-2.9
49,033	-		PFLU_RS00240	0.89	-0.3
49,033	-		PFLU_RS00240	0.89	+0.7
49,033	-		PFLU_RS00240	0.89	-1.7
49,033	-		PFLU_RS00240	0.89	-0.3
49,033	-		PFLU_RS00240	0.89	-1.0
49,033	-		PFLU_RS00240	0.89	-0.7
49,033	-		PFLU_RS00240	0.89	-1.0
49,033	-		PFLU_RS00240	0.89	-1.2
49,033	-		PFLU_RS00240	0.89	+2.5
49,033	-		PFLU_RS00240	0.89	-0.4
49,033	-		PFLU_RS00240	0.89	-1.0
49,033	-		PFLU_RS00240	0.89	-0.6
49,033	-		PFLU_RS00240	0.89	-0.6
49,033	-		PFLU_RS00240	0.89	-1.1
49,038	+		PFLU_RS00240	0.89	-0.2
49,038	+		PFLU_RS00240	0.89	-1.3
49,038	+		PFLU_RS00240	0.89	-1.7
49,038	+		PFLU_RS00240	0.89	-1.8
49,038	+		PFLU_RS00240	0.89	-1.6
49,038	+		PFLU_RS00240	0.89	+0.8
49,038	+		PFLU_RS00240	0.89	-0.3
49,038	+		PFLU_RS00240	0.89	+1.1
49,038	+		PFLU_RS00240	0.89	-1.4
49,038	+		PFLU_RS00240	0.89	-0.0
49,038	+		PFLU_RS00240	0.89	+0.3
49,039	-		PFLU_RS00240	0.90	-2.3
49,039	-		PFLU_RS00240	0.90	+0.5
49,039	-		PFLU_RS00240	0.90	-0.3
49,039	-		PFLU_RS00240	0.90	+0.5
49,039	-		PFLU_RS00240	0.90	+1.5
49,039	-		PFLU_RS00240	0.90	+0.9
49,039	-		PFLU_RS00240	0.90	-0.0
49,039	-		PFLU_RS00240	0.90	-0.1
49,039	-		PFLU_RS00240	0.90	+1.7
49,039	-		PFLU_RS00240	0.90	-1.1
49,039	-		PFLU_RS00240	0.90	-0.5
49,039	-		PFLU_RS00240	0.90	-0.6
49,039	-		PFLU_RS00240	0.90	-2.6
49,039	-		PFLU_RS00240	0.90	-0.5
49,039	-		PFLU_RS00240	0.90	-1.4
49,039	-		PFLU_RS00240	0.90	-2.1
49,039	-		PFLU_RS00240	0.90	-0.5
49,285	+		PFLU_RS00245	0.13	-1.6
49,285	+		PFLU_RS00245	0.13	+0.5
49,286	-		PFLU_RS00245	0.13	+2.5
49,353	+		PFLU_RS00245	0.37	-2.5
49,353	+		PFLU_RS00245	0.37	-0.9
49,353	+		PFLU_RS00245	0.37	-0.8
49,353	+		PFLU_RS00245	0.37	-1.7
49,354	-		PFLU_RS00245	0.38	-0.1
49,354	-		PFLU_RS00245	0.38	-0.7
49,354	-		PFLU_RS00245	0.38	-0.5
49,354	-		PFLU_RS00245	0.38	-0.9
49,382	+		PFLU_RS00245	0.48	-0.1
49,382	+		PFLU_RS00245	0.48	-1.2
49,382	+		PFLU_RS00245	0.48	+0.5
49,384	+		PFLU_RS00245	0.49	-1.2
49,384	+		PFLU_RS00245	0.49	-1.4
49,384	+		PFLU_RS00245	0.49	-0.5
49,384	+		PFLU_RS00245	0.49	-1.1
49,384	+		PFLU_RS00245	0.49	-1.1
49,385	-		PFLU_RS00245	0.49	+1.5
49,385	-		PFLU_RS00245	0.49	+0.1
49,444	+		PFLU_RS00245	0.70	+1.3
49,444	+		PFLU_RS00245	0.70	-0.1
49,444	+		PFLU_RS00245	0.70	-2.3
49,444	+		PFLU_RS00245	0.70	-1.4
49,444	+		PFLU_RS00245	0.70	-2.0
49,445	-		PFLU_RS00245	0.71	+0.9
49,445	-		PFLU_RS00245	0.71	-0.7
49,445	-		PFLU_RS00245	0.71	-2.8
49,445	-		PFLU_RS00245	0.71	+0.1
49,445	-		PFLU_RS00245	0.71	-0.6
49,445	-		PFLU_RS00245	0.71	-2.7
49,474	+		PFLU_RS00245	0.81	-1.6
49,474	+		PFLU_RS00245	0.81	-2.1
49,474	+		PFLU_RS00245	0.81	+2.0
49,475	-		PFLU_RS00245	0.82	+0.2
49,475	-		PFLU_RS00245	0.82	-2.1
49,475	-		PFLU_RS00245	0.82	-1.1
49,523	+				-0.7
49,523	+				-0.1
49,523	+				-0.2
49,524	-				-1.5
49,600	+				+2.5
49,600	+				+2.8
49,600	+				-2.1
49,600	+				+0.4
49,600	+				-0.3
49,600	+				-0.1
49,601	-				-1.3
49,729	+		PFLU_RS00250	0.20	-1.4
49,828	+		PFLU_RS00250	0.35	-0.7
49,828	+		PFLU_RS00250	0.35	+0.9
49,828	+		PFLU_RS00250	0.35	-0.5
49,828	+		PFLU_RS00250	0.35	+2.7
49,828	+		PFLU_RS00250	0.35	-2.0
49,828	+		PFLU_RS00250	0.35	+0.8
49,828	+		PFLU_RS00250	0.35	+0.9
49,911	-		PFLU_RS00250	0.47	+2.8
49,911	-		PFLU_RS00250	0.47	+0.8
49,944	+		PFLU_RS00250	0.53	-1.1
49,944	+		PFLU_RS00250	0.53	+0.8
49,944	+		PFLU_RS00250	0.53	+2.9
49,944	+		PFLU_RS00250	0.53	+0.9
49,944	+		PFLU_RS00250	0.53	+0.8
49,944	+		PFLU_RS00250	0.53	+0.3
49,944	+		PFLU_RS00250	0.53	-0.5
49,944	+		PFLU_RS00250	0.53	-0.9
49,944	+		PFLU_RS00250	0.53	-2.3
49,944	+		PFLU_RS00250	0.53	+1.3
49,944	+		PFLU_RS00250	0.53	-1.1
49,944	+		PFLU_RS00250	0.53	-1.8
49,944	+		PFLU_RS00250	0.53	-1.1
49,944	+		PFLU_RS00250	0.53	-2.2
49,944	+		PFLU_RS00250	0.53	+0.6
49,944	+		PFLU_RS00250	0.53	+2.0
49,944	+		PFLU_RS00250	0.53	-0.3
49,944	+		PFLU_RS00250	0.53	-2.5
49,945	-		PFLU_RS00250	0.53	-0.6
49,945	-		PFLU_RS00250	0.53	+0.6
49,945	-		PFLU_RS00250	0.53	+3.7
49,945	-		PFLU_RS00250	0.53	-0.9
49,945	-		PFLU_RS00250	0.53	-1.4
49,945	-		PFLU_RS00250	0.53	+0.1
49,945	-		PFLU_RS00250	0.53	+0.6
49,945	-		PFLU_RS00250	0.53	-3.0
49,945	-		PFLU_RS00250	0.53	-1.1
49,945	-		PFLU_RS00250	0.53	+0.7
49,945	-		PFLU_RS00250	0.53	-1.8
49,960	+		PFLU_RS00250	0.55	-2.1
49,960	+		PFLU_RS00250	0.55	+1.1
49,961	-		PFLU_RS00250	0.55	+0.6
49,961	-		PFLU_RS00250	0.55	+0.9
49,961	-		PFLU_RS00250	0.55	-1.7
49,971	+		PFLU_RS00250	0.57	-0.8
49,971	+		PFLU_RS00250	0.57	+0.6
49,971	+		PFLU_RS00250	0.57	+1.5
49,971	+		PFLU_RS00250	0.57	+1.5
49,971	+		PFLU_RS00250	0.57	-0.5
49,971	+		PFLU_RS00250	0.57	-0.6
49,971	+		PFLU_RS00250	0.57	+0.0
49,971	+		PFLU_RS00250	0.57	+0.9
49,971	+		PFLU_RS00250	0.57	+1.4
49,971	+		PFLU_RS00250	0.57	-1.8
49,972	-		PFLU_RS00250	0.57	+1.5
49,972	-		PFLU_RS00250	0.57	-1.9
49,972	-		PFLU_RS00250	0.57	-1.8
49,972	-		PFLU_RS00250	0.57	+0.3
49,972	-		PFLU_RS00250	0.57	-1.6
49,972	-		PFLU_RS00250	0.57	-1.8
49,972	-		PFLU_RS00250	0.57	+0.8
49,972	-		PFLU_RS00250	0.57	+0.6
49,972	-		PFLU_RS00250	0.57	-1.5
49,972	-		PFLU_RS00250	0.57	+0.2
49,972	-		PFLU_RS00250	0.57	+1.7
49,972	-		PFLU_RS00250	0.57	-2.9
49,972	-		PFLU_RS00250	0.57	+0.7
49,972	-		PFLU_RS00250	0.57	-2.8
49,972	-		PFLU_RS00250	0.57	-2.6
49,972	-		PFLU_RS00250	0.57	+1.2
50,095	+		PFLU_RS00250	0.75	-0.6
50,125	+		PFLU_RS00250	0.80	+1.2
50,125	+		PFLU_RS00250	0.80	-0.4
50,125	+		PFLU_RS00250	0.80	+0.1
50,125	+		PFLU_RS00250	0.80	+0.9
50,125	+		PFLU_RS00250	0.80	+1.5
50,125	+		PFLU_RS00250	0.80	-0.5
50,125	+		PFLU_RS00250	0.80	+2.5
50,125	+		PFLU_RS00250	0.80	-0.3
50,125	+		PFLU_RS00250	0.80	+0.3
50,125	+		PFLU_RS00250	0.80	-0.6
50,125	+		PFLU_RS00250	0.80	+0.7
50,125	+		PFLU_RS00250	0.80	-0.2
50,125	+		PFLU_RS00250	0.80	+0.7
50,125	+		PFLU_RS00250	0.80	-2.3
50,126	-		PFLU_RS00250	0.80	+1.1
50,126	-		PFLU_RS00250	0.80	+0.6
50,126	-		PFLU_RS00250	0.80	+0.8
50,126	-		PFLU_RS00250	0.80	+1.4
50,126	-		PFLU_RS00250	0.80	+1.2
50,126	-		PFLU_RS00250	0.80	-0.1
50,126	-		PFLU_RS00250	0.80	-2.0
50,126	-		PFLU_RS00250	0.80	-2.3
50,191	+				-1.4
50,191	+				-1.1
50,191	+				+1.3
50,191	+				-0.3
50,226	+				-0.9
50,226	+				+0.0
50,226	+				-2.1
50,226	+				+1.1
50,226	+				+1.1
50,227	-				-1.5
50,227	-				-2.2
50,227	-				+0.1
50,227	-				+1.0
50,227	-				-2.2
50,227	-				-1.2
50,227	-				+1.1
50,227	-				-0.7
50,227	-				-0.2
50,227	-				+0.9
50,361	+				+1.3
50,362	-				+1.8
50,362	-				+0.8
50,381	+				+0.0
50,381	+				+1.8
50,381	+				-0.2
50,381	+				-0.0
50,381	+				-0.7
50,381	+				+1.0
50,381	+				+0.4
50,381	+				-2.8
50,382	-				-0.3
50,382	-				-2.7
50,382	-				-1.3
50,382	-				+0.0
50,382	-				+1.6
50,382	-				+0.9
50,382	-				-2.8
50,382	-				-0.1
50,382	-				+0.5
50,382	-				+2.3
50,398	-				+0.6
50,406	+				+0.7
50,410	+				-0.7
50,410	+				-0.8
50,411	-				-0.9
50,411	-				+1.0
50,430	+				+0.0
50,430	+				-0.7
50,430	+				-1.9
50,430	+				+2.5
50,431	-				-1.0
50,431	-				-2.8
50,431	-				-1.1
50,431	-				-0.4
50,498	+				+0.3
50,498	+				+1.2
50,499	-				-0.1
50,499	-				-0.7