Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25930 and BWI76_RS25935 overlap by 14 nucleotides BWI76_RS25935 and BWI76_RS25940 overlap by 80 nucleotides BWI76_RS25940 and BWI76_RS25945 are separated by 21 nucleotides
BWI76_RS25930: BWI76_RS25930 - glutathione-regulated potassium-efflux system protein KefB, at 5,360,341 to 5,362,146
_RS25930
BWI76_RS25935: BWI76_RS25935 - glutathione-regulated potassium-efflux system ancillary protein KefG, at 5,362,133 to 5,362,693
_RS25935
BWI76_RS25940: BWI76_RS25940 - hypothetical protein, at 5,362,614 to 5,362,847
_RS25940
BWI76_RS25945: BWI76_RS25945 - ABC transporter ATP-binding protein, at 5,362,869 to 5,364,773
_RS25945
Position (kb) 5362
5363 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5361.199 kb on + strand, within BWI76_RS25930 at 5361.259 kb on + strand, within BWI76_RS25930 at 5361.267 kb on - strand, within BWI76_RS25930 at 5361.389 kb on + strand, within BWI76_RS25930 at 5361.407 kb on - strand, within BWI76_RS25930 at 5361.478 kb on + strand, within BWI76_RS25930 at 5361.493 kb on + strand, within BWI76_RS25930 at 5361.542 kb on - strand, within BWI76_RS25930 at 5361.692 kb on + strand, within BWI76_RS25930 at 5361.706 kb on - strand, within BWI76_RS25930 at 5361.724 kb on + strand, within BWI76_RS25930 at 5361.741 kb on - strand, within BWI76_RS25930 at 5361.932 kb on - strand, within BWI76_RS25930 at 5362.003 kb on + strand at 5362.211 kb on + strand, within BWI76_RS25935 at 5362.438 kb on - strand, within BWI76_RS25935 at 5362.480 kb on - strand, within BWI76_RS25935 at 5362.480 kb on - strand, within BWI76_RS25935 at 5362.927 kb on - strand at 5362.937 kb on + strand at 5363.187 kb on + strand, within BWI76_RS25945 at 5363.678 kb on + strand, within BWI76_RS25945
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml remove 5,361,199 + BWI76_RS25930 0.48 -0.7 5,361,259 + BWI76_RS25930 0.51 +1.0 5,361,267 - BWI76_RS25930 0.51 -1.2 5,361,389 + BWI76_RS25930 0.58 -1.2 5,361,407 - BWI76_RS25930 0.59 -1.7 5,361,478 + BWI76_RS25930 0.63 -1.3 5,361,493 + BWI76_RS25930 0.64 -0.9 5,361,542 - BWI76_RS25930 0.67 -1.3 5,361,692 + BWI76_RS25930 0.75 -2.3 5,361,706 - BWI76_RS25930 0.76 -0.4 5,361,724 + BWI76_RS25930 0.77 -1.0 5,361,741 - BWI76_RS25930 0.78 +0.4 5,361,932 - BWI76_RS25930 0.88 +0.3 5,362,003 + -1.3 5,362,211 + BWI76_RS25935 0.14 +1.1 5,362,438 - BWI76_RS25935 0.54 -0.6 5,362,480 - BWI76_RS25935 0.62 -0.1 5,362,480 - BWI76_RS25935 0.62 -0.3 5,362,927 - +2.0 5,362,937 + +0.6 5,363,187 + BWI76_RS25945 0.17 +0.8 5,363,678 + BWI76_RS25945 0.42 +0.2
Or see this region's nucleotide sequence