Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23465

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
4,895,136	-		BWI76_RS23460	0.36	+1.8
4,895,223	+		BWI76_RS23460	0.43	+1.9
4,895,616	+		BWI76_RS23460	0.75	+1.5
4,895,825	+				-0.1
4,895,838	+				-0.2
4,895,893	+				+0.1
4,895,946	-				-0.1
4,895,992	+				+0.8
4,895,992	+				+0.7
4,896,000	-				-0.3
4,896,024	-				+0.0
4,896,032	+				+1.1
4,896,260	+		BWI76_RS23465	0.26	-0.3
4,896,358	+		BWI76_RS23465	0.37	+0.7
4,896,387	+		BWI76_RS23465	0.40	+0.8
4,896,401	-		BWI76_RS23465	0.42	+0.5
4,896,470	+		BWI76_RS23465	0.50	+1.2
4,896,553	-		BWI76_RS23465	0.59	+1.3
4,896,684	+		BWI76_RS23465	0.74	-0.1
4,896,692	-		BWI76_RS23465	0.75	+0.9
4,896,768	-		BWI76_RS23465	0.84	+0.2
4,896,807	+		BWI76_RS23465	0.88	+0.6
4,896,807	+		BWI76_RS23465	0.88	+0.9
4,896,816	-		BWI76_RS23465	0.89	+2.1
4,896,869	+				-1.0
4,896,877	-				-1.8
4,896,882	-				+1.4
4,896,889	+				-0.7
4,896,890	+				-0.0
4,896,890	+				+0.9
4,896,890	+				+0.9
4,896,890	+				-0.4
4,896,891	-				+0.5
4,896,896	+				-0.8
4,896,898	-				+0.4
4,896,901	+				-1.4
4,896,914	-				+1.8
4,896,915	-				+1.9
4,896,916	-				+2.2
4,896,916	-				-1.4
4,896,927	+				+1.3
4,896,960	-				+1.6
4,896,963	+				-0.7
4,896,969	+				-1.0
4,896,971	-				+1.4
4,896,977	-				+1.4
4,896,977	-				+0.8
4,896,983	+				-3.6
4,896,983	+				-1.1
4,896,986	+				-1.3
4,896,986	+				-1.1
4,896,986	+				-1.0
4,896,991	-				+0.5
4,896,991	-				-2.1
4,896,993	+				-1.1
4,896,994	-				+1.7
4,896,994	-				+0.7
4,896,994	-				+1.5
4,897,000	+				-1.2
4,897,023	-				+1.9
4,897,030	+				-1.4
4,897,035	+				-0.5
4,897,035	+				-1.2
4,897,035	+				-1.1
4,897,035	+				-2.0
4,897,035	+				-2.7
4,897,035	+				-1.4
4,897,035	+				-3.1
4,897,035	+				-2.0
4,897,035	+				-0.9
4,897,038	-				+0.4
4,897,040	+				-2.1
4,897,040	+				-1.0
4,897,043	-				+0.9
4,897,043	-				+1.7
4,897,043	-				+2.0
4,897,043	-				-1.7
4,897,043	-				-2.1
4,897,043	-				+1.7
4,897,043	-				+0.0
4,897,043	-				+2.1
4,897,043	-				+1.7
4,897,047	+				-1.1
4,897,052	+				-1.2
4,897,052	+				-1.6
4,897,052	+				-1.2
4,897,052	+				-1.2
4,897,052	+				-0.8
4,897,052	+				-1.7
4,897,053	-				+0.5
4,897,053	-				+2.1
4,897,055	-				-1.0
4,897,060	-				+2.3
4,897,060	-				-0.1
4,897,060	-				+2.2
4,897,060	-				+1.0
4,897,060	-				+1.2
4,897,076	+				-1.9
4,897,089	-				+1.1
4,897,096	-				+0.0
4,897,122	+				-1.1
4,897,203	-				+0.5
4,897,204	-				+2.3
4,897,215	-				+1.0
4,897,220	+				-1.4
4,897,228	-				+0.9
4,897,228	-				-2.0
4,897,271	+				-2.5
4,897,292	+				-0.7
4,897,292	+				+2.2
4,897,292	+				+0.6
4,897,295	-				+1.5
4,897,297	+				+2.1
4,897,300	-				+0.9
4,897,305	-				-0.1
4,897,305	-				-0.7
4,897,311	+				+0.9
4,897,319	-				+1.0
4,897,319	-				+1.9
4,897,319	-				+1.0
4,897,319	-				+0.4
4,897,319	-				-0.1
4,897,333	-				-0.7
4,897,333	-				+1.0
4,897,357	+				-0.2
4,897,375	-		BWI76_RS23470	0.11	+1.9
4,897,414	-		BWI76_RS23470	0.17	-1.1
4,897,460	+		BWI76_RS23470	0.23	-0.4
4,897,485	-		BWI76_RS23470	0.27	+2.6
4,897,504	-		BWI76_RS23470	0.30	-0.7
4,897,530	-		BWI76_RS23470	0.33	+2.2
4,897,557	+		BWI76_RS23470	0.37	-0.4
4,897,575	+		BWI76_RS23470	0.40	-0.1
4,897,575	+		BWI76_RS23470	0.40	+3.8
4,897,575	+		BWI76_RS23470	0.40	-0.1
4,897,575	+		BWI76_RS23470	0.40	+0.6
4,897,583	-		BWI76_RS23470	0.41	+1.2
4,897,594	+		BWI76_RS23470	0.42	+1.9
4,897,594	+		BWI76_RS23470	0.42	+0.9
4,897,594	-		BWI76_RS23470	0.42	+1.4
4,897,596	+		BWI76_RS23470	0.43	+1.6
4,897,600	+		BWI76_RS23470	0.43	+1.4
4,897,600	+		BWI76_RS23470	0.43	+1.3
4,897,600	+		BWI76_RS23470	0.43	+2.1
4,897,602	-		BWI76_RS23470	0.44	-0.1
4,897,602	-		BWI76_RS23470	0.44	+1.7
4,897,602	-		BWI76_RS23470	0.44	+0.9
4,897,605	+		BWI76_RS23470	0.44	+1.8
4,897,608	-		BWI76_RS23470	0.44	+0.3
4,897,608	-		BWI76_RS23470	0.44	+1.5
4,897,611	+				+2.7
4,897,613	-		BWI76_RS23470	0.45	+0.5
4,897,618	-		BWI76_RS23470	0.46	-0.7
4,897,619	-		BWI76_RS23470	0.46	-1.4
4,897,655	+				-0.1
4,897,663	-		BWI76_RS23470	0.52	+1.9
4,897,663	-		BWI76_RS23470	0.52	+3.2
4,897,709	+		BWI76_RS23470	0.59	-1.4
4,897,709	+		BWI76_RS23470	0.59	+2.3
4,897,721	+		BWI76_RS23470	0.61	+0.2
4,897,723	+		BWI76_RS23470	0.61	-1.9
4,897,723	+		BWI76_RS23470	0.61	-0.1
4,897,723	+		BWI76_RS23470	0.61	+2.5
4,897,729	-		BWI76_RS23470	0.62	+1.8
4,897,729	-		BWI76_RS23470	0.62	+0.5
4,897,729	-		BWI76_RS23470	0.62	+2.7
4,897,731	+		BWI76_RS23470	0.62	+0.9
4,897,731	+		BWI76_RS23470	0.62	+1.4
4,897,731	+		BWI76_RS23470	0.62	+1.4
4,897,731	-		BWI76_RS23470	0.62	+0.6
4,897,731	-		BWI76_RS23470	0.62	-0.1
4,897,731	-		BWI76_RS23470	0.62	-1.1
4,897,734	-		BWI76_RS23470	0.62	+4.1
4,897,734	-		BWI76_RS23470	0.62	+1.2
4,897,736	-		BWI76_RS23470	0.63	-1.7
4,897,739	-		BWI76_RS23470	0.63	+0.9
4,897,739	-		BWI76_RS23470	0.63	-0.1
4,897,739	-		BWI76_RS23470	0.63	-1.1
4,897,739	-		BWI76_RS23470	0.63	-1.4
4,897,742	-		BWI76_RS23470	0.64	+0.1
4,897,752	-		BWI76_RS23470	0.65	-0.1
4,897,765	+		BWI76_RS23470	0.67	+2.4
4,897,765	+		BWI76_RS23470	0.67	+0.7
4,897,766	+		BWI76_RS23470	0.67	-1.4
4,897,766	+		BWI76_RS23470	0.67	+1.9
4,897,766	+		BWI76_RS23470	0.67	+1.2
4,897,771	+		BWI76_RS23470	0.68	+2.0
4,897,773	-		BWI76_RS23470	0.68	+1.5
4,897,773	-		BWI76_RS23470	0.68	-0.7
4,897,789	+		BWI76_RS23470	0.70	+0.6
4,897,791	+		BWI76_RS23470	0.71	-0.1
4,897,791	+				+0.9
4,897,801	+		BWI76_RS23470	0.72	+0.6
4,897,809	-		BWI76_RS23470	0.73	+2.0
4,897,829	-		BWI76_RS23470	0.76	-0.5
4,897,858	+		BWI76_RS23470	0.80	+1.4
4,897,858	+		BWI76_RS23470	0.80	+0.9
4,897,875	+		BWI76_RS23470	0.82	+2.2
4,897,883	-				-0.1