Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10000

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
2,105,437	-		BWI76_RS09995	0.72	+0.0
2,105,444	+		BWI76_RS09995	0.73	-0.5
2,105,444	+		BWI76_RS09995	0.73	-0.5
2,105,534	-		BWI76_RS09995	0.77	-2.0
2,105,879	-				-0.0
2,105,910	+				+1.1
2,105,910	+				-0.0
2,105,918	-				+1.7
2,105,918	-				-2.5
2,106,056	-				-0.3
2,106,128	+		BWI76_RS10000	0.20	-1.5
2,106,128	+		BWI76_RS10000	0.20	-0.9
2,106,197	-		BWI76_RS10000	0.36	-0.8
2,106,197	-		BWI76_RS10000	0.36	-0.4
2,106,269	+		BWI76_RS10000	0.51	-0.8
2,106,277	-		BWI76_RS10000	0.53	-2.0
2,106,323	-		BWI76_RS10000	0.63	+0.7
2,106,323	-		BWI76_RS10000	0.63	-1.3
2,106,323	-		BWI76_RS10000	0.63	+0.7
2,106,447	+				-1.7
2,106,455	-				-1.1
2,106,524	-				+0.2
2,106,582	+				+0.6
2,106,584	-				-0.4
2,106,626	-				-1.9
2,106,708	-		BWI76_RS10005	0.15	+0.7
2,106,708	-		BWI76_RS10005	0.15	+0.1
2,106,720	-		BWI76_RS10005	0.18	+0.1
2,106,772	+		BWI76_RS10005	0.30	-0.3
2,106,801	+		BWI76_RS10005	0.37	-1.0
2,106,804	+		BWI76_RS10005	0.38	-0.4
2,106,817	-		BWI76_RS10005	0.41	-0.4
2,106,882	+		BWI76_RS10005	0.57	-1.1
2,106,905	+		BWI76_RS10005	0.62	-0.3
2,106,949	+		BWI76_RS10005	0.73	-1.3
2,106,985	-		BWI76_RS10005	0.82	+0.1
2,106,998	-		BWI76_RS10005	0.85	+3.1
2,107,007	+		BWI76_RS10005	0.87	+0.2
2,107,042	+				+0.9
2,107,046	+				-0.9
2,107,061	+				+0.7
2,107,061	+				-0.3
2,107,090	-				-0.4
2,107,091	-				-0.9
2,107,091	-				-0.9
2,107,188	-				+3.5
2,107,196	-				+1.3