Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04960

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
1,041,210	-				+0.2
1,041,258	-				+0.5
1,041,498	+				+0.8
1,041,749	+		BWI76_RS04955	0.31	-0.6
1,041,801	-		BWI76_RS04955	0.40	-0.9
1,042,160	-				-0.2
1,042,160	-				-1.1
1,042,279	+		BWI76_RS04960	0.16	-1.8
1,042,303	-				+1.0
1,042,491	+		BWI76_RS04960	0.48	+0.5
1,042,585	+		BWI76_RS04960	0.62	+0.4
1,042,624	-		BWI76_RS04960	0.68	+1.1
1,042,785	+				+0.0
1,043,048	+		BWI76_RS04965	0.12	+0.5
1,043,131	-		BWI76_RS04965	0.20	-0.4
1,043,190	-		BWI76_RS04965	0.27	-1.5
1,043,524	+		BWI76_RS04965	0.63	+0.4
1,043,532	-		BWI76_RS04965	0.64	-0.2
1,043,560	+		BWI76_RS04965	0.67	-1.0
1,043,784	-				+0.3