Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04930

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
1,033,450	+				+0.9
1,033,594	+		BWI76_RS04925	0.19	-0.3
1,033,602	-		BWI76_RS04925	0.20	-1.0
1,033,653	+		BWI76_RS04925	0.26	+0.1
1,033,717	-		BWI76_RS04925	0.34	+0.8
1,033,722	-		BWI76_RS04925	0.34	+1.0
1,033,874	+		BWI76_RS04925	0.52	+0.4
1,034,079	+		BWI76_RS04925	0.76	-1.0
1,034,087	-		BWI76_RS04925	0.77	-0.3
1,034,231	+				-1.6
1,034,278	+				-0.5
1,034,360	-				-0.4
1,034,431	+				+2.9
1,034,431	-				-0.6
1,034,431	-				-2.0
1,034,463	+				-1.3
1,034,474	-				+0.5
1,034,542	+				+1.4
1,034,638	-		BWI76_RS04930	0.12	-0.5
1,034,651	+		BWI76_RS04930	0.12	-0.0
1,034,659	-		BWI76_RS04930	0.13	-0.8
1,034,739	-		BWI76_RS04930	0.17	-0.4
1,034,795	+		BWI76_RS04930	0.21	-0.1
1,035,013	+		BWI76_RS04930	0.34	-0.7
1,035,013	-		BWI76_RS04930	0.34	+0.2
1,035,016	-		BWI76_RS04930	0.34	-1.8
1,035,024	+		BWI76_RS04930	0.34	-0.9
1,035,024	+		BWI76_RS04930	0.34	-0.8
1,035,024	-		BWI76_RS04930	0.34	+1.0
1,035,058	-		BWI76_RS04930	0.36	-0.8
1,035,154	+		BWI76_RS04930	0.42	+0.6
1,035,192	+		BWI76_RS04930	0.44	+0.6
1,035,195	+		BWI76_RS04930	0.44	-0.3
1,035,344	+		BWI76_RS04930	0.53	-0.6
1,035,352	-		BWI76_RS04930	0.53	-1.3
1,035,412	+		BWI76_RS04930	0.57	+0.5
1,035,418	+		BWI76_RS04930	0.57	+0.9
1,035,420	-		BWI76_RS04930	0.57	+0.6
1,035,426	-		BWI76_RS04930	0.58	-0.7
1,035,426	-		BWI76_RS04930	0.58	-1.8
1,035,444	+		BWI76_RS04930	0.59	+1.4
1,035,444	+		BWI76_RS04930	0.59	+1.0
1,035,451	+		BWI76_RS04930	0.59	-0.7
1,035,464	-		BWI76_RS04930	0.60	+0.1
1,035,474	-		BWI76_RS04930	0.60	+0.6
1,035,479	+		BWI76_RS04930	0.61	-0.8
1,035,479	+		BWI76_RS04930	0.61	-1.0
1,035,479	+		BWI76_RS04930	0.61	-1.6
1,035,487	-		BWI76_RS04930	0.61	-1.3
1,035,487	-		BWI76_RS04930	0.61	-2.2
1,035,487	-		BWI76_RS04930	0.61	+0.9
1,035,487	-		BWI76_RS04930	0.61	-2.0
1,035,487	-		BWI76_RS04930	0.61	-0.7
1,035,487	-		BWI76_RS04930	0.61	+0.3
1,035,495	-		BWI76_RS04930	0.62	-0.4
1,035,495	-		BWI76_RS04930	0.62	-1.0
1,035,495	-		BWI76_RS04930	0.62	-1.2
1,035,502	-		BWI76_RS04930	0.62	+0.2
1,035,560	+		BWI76_RS04930	0.65	-3.3
1,035,568	-		BWI76_RS04930	0.66	-2.4
1,035,568	-		BWI76_RS04930	0.66	-1.3
1,035,568	-		BWI76_RS04930	0.66	+0.1
1,035,574	-		BWI76_RS04930	0.66	-0.6
1,035,578	-		BWI76_RS04930	0.67	-0.0
1,035,578	-		BWI76_RS04930	0.67	-0.5
1,035,647	+		BWI76_RS04930	0.71	+0.3
1,035,647	+		BWI76_RS04930	0.71	+2.3
1,035,647	+				-0.0
1,035,647	+		BWI76_RS04930	0.71	+0.3
1,035,652	+		BWI76_RS04930	0.71	-0.6
1,035,655	-		BWI76_RS04930	0.71	-2.3
1,035,655	-				-0.6
1,035,655	-		BWI76_RS04930	0.71	-2.2
1,035,655	-		BWI76_RS04930	0.71	+1.6
1,035,655	-		BWI76_RS04930	0.71	-0.6
1,035,655	-		BWI76_RS04930	0.71	+1.0
1,035,660	-		BWI76_RS04930	0.71	+1.1
1,035,662	+		BWI76_RS04930	0.71	-2.2
1,035,669	+		BWI76_RS04930	0.72	-1.3
1,035,669	+		BWI76_RS04930	0.72	-0.6
1,035,677	-		BWI76_RS04930	0.72	-1.8
1,035,694	-		BWI76_RS04930	0.73	+0.3
1,035,815	+				-1.6
1,035,817	-		BWI76_RS04930	0.81	+1.0
1,035,835	-		BWI76_RS04930	0.82	+1.0
1,035,950	+		BWI76_RS04930	0.88	-0.6
1,035,950	+		BWI76_RS04930	0.88	-1.6
1,035,960	+		BWI76_RS04930	0.89	-0.6
1,035,987	+				-1.1
1,036,027	+				-0.6
1,036,027	+				+0.4
1,036,027	+				+0.1
1,036,035	-				-0.6
1,036,042	+				-1.2
1,036,043	+				-1.3
1,036,051	-				-1.3
1,036,080	-				-1.8
1,036,093	+				+0.2
1,036,093	+				-2.0
1,036,101	-				+1.2
1,036,165	-				-2.8
1,036,176	-				-1.1
1,036,215	-		BWI76_RS04935	0.21	+1.8
1,036,222	+		BWI76_RS04935	0.23	+1.0
1,036,230	-		BWI76_RS04935	0.26	-1.0
1,036,230	-		BWI76_RS04935	0.26	+1.0
1,036,251	+		BWI76_RS04935	0.32	-2.5
1,036,270	+		BWI76_RS04935	0.38	-1.3
1,036,285	+		BWI76_RS04935	0.43	-2.0
1,036,285	+		BWI76_RS04935	0.43	-0.0
1,036,285	+		BWI76_RS04935	0.43	+1.6
1,036,285	+		BWI76_RS04935	0.43	-1.8
1,036,285	+		BWI76_RS04935	0.43	-1.1
1,036,293	-		BWI76_RS04935	0.45	-2.0
1,036,303	+		BWI76_RS04935	0.48	-2.2
1,036,303	+		BWI76_RS04935	0.48	+0.7
1,036,303	+		BWI76_RS04935	0.48	-1.0
1,036,303	+		BWI76_RS04935	0.48	-0.1
1,036,305	+		BWI76_RS04935	0.49	-0.3
1,036,305	+		BWI76_RS04935	0.49	-1.3
1,036,308	+		BWI76_RS04935	0.50	-3.8
1,036,308	+		BWI76_RS04935	0.50	-0.0
1,036,308	+		BWI76_RS04935	0.50	+0.3
1,036,308	+		BWI76_RS04935	0.50	+3.0
1,036,308	+		BWI76_RS04935	0.50	-0.3
1,036,308	+		BWI76_RS04935	0.50	-0.1
1,036,311	-		BWI76_RS04935	0.50	-1.8
1,036,311	-		BWI76_RS04935	0.50	-1.3
1,036,315	+		BWI76_RS04935	0.52	-1.6
1,036,315	+		BWI76_RS04935	0.52	-0.6
1,036,316	-		BWI76_RS04935	0.52	-2.7
1,036,323	-		BWI76_RS04935	0.54	-0.6
1,036,323	-		BWI76_RS04935	0.54	-0.3
1,036,323	-		BWI76_RS04935	0.54	-0.9
1,036,323	-		BWI76_RS04935	0.54	-2.0
1,036,335	-		BWI76_RS04935	0.58	+1.7
1,036,371	+		BWI76_RS04935	0.69	-1.6
1,036,371	+		BWI76_RS04935	0.69	+1.3
1,036,371	+		BWI76_RS04935	0.69	-0.0
1,036,371	+		BWI76_RS04935	0.69	+0.2
1,036,371	+		BWI76_RS04935	0.69	-0.6
1,036,371	+		BWI76_RS04935	0.69	-1.6
1,036,371	+		BWI76_RS04935	0.69	-1.3
1,036,379	-		BWI76_RS04935	0.71	-0.0
1,036,380	-		BWI76_RS04935	0.72	+1.0
1,036,382	+		BWI76_RS04935	0.72	+1.1
1,036,392	+		BWI76_RS04935	0.75	-1.4
1,036,392	+		BWI76_RS04935	0.75	-1.3
1,036,406	+		BWI76_RS04935	0.80	-0.7
1,036,417	+		BWI76_RS04935	0.83	+1.0
1,036,417	+		BWI76_RS04935	0.83	-1.0
1,036,417	+		BWI76_RS04935	0.83	+1.0
1,036,417	+		BWI76_RS04935	0.83	+1.3
1,036,417	+		BWI76_RS04935	0.83	-1.8
1,036,417	+		BWI76_RS04935	0.83	+1.0
1,036,417	+		BWI76_RS04935	0.83	-0.0
1,036,417	+		BWI76_RS04935	0.83	-0.2
1,036,417	+		BWI76_RS04935	0.83	-0.6
1,036,417	+		BWI76_RS04935	0.83	-0.6
1,036,417	+		BWI76_RS04935	0.83	-0.3
1,036,417	+		BWI76_RS04935	0.83	-0.6
1,036,422	+		BWI76_RS04935	0.84	-0.6
1,036,422	+		BWI76_RS04935	0.84	+0.8
1,036,422	+		BWI76_RS04935	0.84	-2.0
1,036,425	-		BWI76_RS04935	0.85	+1.0
1,036,425	-		BWI76_RS04935	0.85	+1.0
1,036,425	-		BWI76_RS04935	0.85	-1.6
1,036,425	-		BWI76_RS04935	0.85	-1.3
1,036,425	-		BWI76_RS04935	0.85	-0.0
1,036,425	-		BWI76_RS04935	0.85	+1.3
1,036,425	-		BWI76_RS04935	0.85	+1.0
1,036,425	-		BWI76_RS04935	0.85	+1.0
1,036,425	-		BWI76_RS04935	0.85	-0.7
1,036,425	-		BWI76_RS04935	0.85	-0.0
1,036,427	-		BWI76_RS04935	0.86	+1.0
1,036,427	-		BWI76_RS04935	0.86	+1.0
1,036,435	-		BWI76_RS04935	0.88	+1.0
1,036,451	-				-1.0
1,036,486	+				-1.3
1,036,494	-				+1.0
1,036,536	-				-1.0
1,036,543	-				+1.6
1,036,600	+				+1.0
1,036,789	-				-0.6
1,036,850	-				-0.6
1,036,850	-				-0.0
1,036,852	+				-0.0
1,036,852	+				-1.0
1,036,852	+				+1.0
1,036,852	+				+1.0
1,036,852	+				-0.9
1,036,852	+				-2.2
1,036,852	+				-0.2
1,036,852	+				-0.0
1,036,852	+				-3.4
1,036,852	+				-0.0
1,036,852	+				-0.0
1,036,852	+				-2.2
1,036,852	+				-2.2
1,036,852	+				+1.0
1,036,857	+				-0.8
1,036,860	-				-0.0
1,036,860	-				-0.1
1,036,860	-				+0.2
1,036,860	-				+1.8
1,036,860	-				-2.1
1,036,860	-				-1.8
1,036,860	-				+2.4
1,036,860	-				-2.3
1,036,860	-				-0.6
1,036,860	-				-0.9
1,036,860	-				+1.2
1,036,860	-				-1.3
1,036,860	-				-0.4
1,036,860	-				-0.1
1,036,860	-				+1.7
1,036,860	-				+1.0
1,036,868	+		BWI76_RS04940	0.10	+1.0
1,036,868	+		BWI76_RS04940	0.10	+0.9
1,036,868	+		BWI76_RS04940	0.10	-1.5
1,036,884	-		BWI76_RS04940	0.15	-0.2
1,036,915	+		BWI76_RS04940	0.24	-0.0
1,036,915	+		BWI76_RS04940	0.24	-1.0
1,036,918	-		BWI76_RS04940	0.25	+0.3
1,036,923	-		BWI76_RS04940	0.26	-0.1
1,036,923	-		BWI76_RS04940	0.26	+0.5
1,036,923	-		BWI76_RS04940	0.26	-0.5
1,036,923	-		BWI76_RS04940	0.26	-2.6
1,036,925	+		BWI76_RS04940	0.27	+1.0
1,036,928	+		BWI76_RS04940	0.28	+1.1
1,036,929	+		BWI76_RS04940	0.28	-2.3
1,036,937	-		BWI76_RS04940	0.30	-1.8
1,036,948	+		BWI76_RS04940	0.33	-3.0
1,037,022	+		BWI76_RS04940	0.55	+2.0
1,037,040	-		BWI76_RS04940	0.60	-0.4
1,037,043	+		BWI76_RS04940	0.61	-1.6
1,037,071	-		BWI76_RS04940	0.69	+0.3
1,037,085	+		BWI76_RS04940	0.73	-0.2
1,037,113	+		BWI76_RS04940	0.81	+0.7
1,037,115	+		BWI76_RS04940	0.81	-1.3
1,037,128	-		BWI76_RS04940	0.85	-2.2