Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03515

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
727,281	+		BWI76_RS03510	0.67	-1.1
727,485	-		BWI76_RS03510	0.74	-0.1
727,494	-		BWI76_RS03510	0.75	+0.1
727,809	-		BWI76_RS03510	0.86	+0.9
727,859	+		BWI76_RS03510	0.88	+0.6
727,933	-				+0.0
727,957	+				+0.6
728,050	+				+0.0
728,073	+				+0.6
728,089	+				+1.9
728,121	-				+1.0
728,259	+				-0.0
728,275	+				-1.2
728,283	-				+0.4
728,393	+		BWI76_RS03515	0.20	+1.4
728,439	-		BWI76_RS03515	0.24	+0.5
728,660	+		BWI76_RS03515	0.45	+0.6
729,171	+				-1.7
729,267	-				-1.7
729,273	+				+0.8
729,278	+				+0.0
729,347	-				-1.0
729,347	-				-0.5
729,469	+				-2.3
729,471	+				+0.6
729,479	-				-1.7
729,528	+				-2.9
729,536	-				-1.1
729,579	+				-1.4
729,579	+				-0.1
729,587	+				-0.7
729,589	+				-0.2
729,595	-				+0.6
729,595	-				+1.1
729,631	-				+0.0
729,646	-				-1.3
729,646	-				-0.2
729,654	-				+0.2
729,658	+				-1.9
729,659	+				+0.5
729,667	-				+1.0
729,667	-				+0.8
729,713	+				+0.1
729,713	+				+2.3
729,720	-				-1.1
729,721	-				+0.2
729,721	-				+1.0
729,726	+				-2.5
729,726	+				+0.2
729,732	-				+1.0
729,734	+				-0.7
729,734	-				+0.6
729,744	-				-0.1
729,757	+				+1.2
729,757	+				+2.3
729,757	+				+0.4
729,759	+				-0.7
729,759	+				-1.3
729,759	+				+0.2
729,759	+				+0.0
729,765	-				+1.7
729,767	-				+0.8
729,767	-				-0.5
729,767	-				+0.3
729,772	-				+1.2
729,835	+				+0.5
729,835	+				+0.4
729,835	+				+2.2
729,835	+				-0.2
729,835	+				+0.6
729,835	+				-1.0
729,835	+				+0.1
729,835	+				+0.0
729,835	+				+1.0
729,835	+				-0.3
729,835	+				-0.2
729,835	+				+0.1
729,835	+				+0.0
729,835	+				+0.7
729,835	+				+0.0
729,837	+				-2.2
729,839	+				-1.3
729,843	-				-1.7
729,843	-				+0.2
729,843	-				+2.3
729,843	-				-0.1
729,843	-				-1.6
729,843	-				+0.9
729,843	-				+0.8
729,843	-				-1.6
729,843	-				-1.8
729,843	-				+0.7
729,843	-				+0.9
729,843	-				-0.9
729,843	-				+1.0
729,845	+				+0.6
729,845	+				+0.6
729,845	+				+0.5
729,845	+				-0.4
729,845	+				+0.8
729,845	+				+1.4
729,845	-				+2.3
729,845	-				+0.0
729,853	-				+2.0
729,853	-				-2.4
729,853	-				+1.0
729,853	-				-0.5
729,853	-				+1.6
729,853	-				-1.5
729,853	-				+0.4
729,853	-				-0.4
729,857	+				+1.6
729,858	+				+1.0
729,858	+				+0.7
729,858	+				+1.0
729,858	+				-0.7
729,858	+				-1.0
729,858	+				+1.6
729,858	+				-2.8
729,859	-				+0.1
729,861	-				+0.8
729,866	-				-1.6
729,866	-				+0.6
729,878	+				+0.9
729,878	-				-0.3
729,894	+				+0.9
729,895	+				+0.6
729,901	-				+0.9
729,955	+		BWI76_RS03520	0.12	+1.8
729,973	+		BWI76_RS03520	0.14	+0.0
729,973	+		BWI76_RS03520	0.14	+2.5
729,973	+		BWI76_RS03520	0.14	+1.6
729,981	-		BWI76_RS03520	0.14	+0.9
729,981	-		BWI76_RS03520	0.14	-1.8
729,981	-		BWI76_RS03520	0.14	-1.9
729,984	+		BWI76_RS03520	0.15	+0.9
729,984	+		BWI76_RS03520	0.15	+0.6
729,984	+		BWI76_RS03520	0.15	+1.6
729,999	+		BWI76_RS03520	0.16	+2.0
730,026	-		BWI76_RS03520	0.18	+0.3
730,087	-		BWI76_RS03520	0.22	+1.4
730,134	+		BWI76_RS03520	0.25	+1.0
730,203	+		BWI76_RS03520	0.30	+0.0
730,231	+		BWI76_RS03520	0.32	-0.7