Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00590

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
116,872	+				-0.9
116,879	+				+1.8
116,884	+				-0.5
116,884	+				-0.3
116,884	+				-1.0
116,884	+				+1.1
116,887	-				-3.9
116,892	-				-1.4
116,892	-				+1.1
116,892	-				-0.5
116,892	-				+1.3
116,892	-				+1.0
116,892	-				+0.4
116,893	+				+0.4
116,893	+				-3.2
116,893	+				+1.9
116,894	-				-1.8
116,894	-				-2.2
116,901	-				-2.2
116,950	-				+3.0
117,034	-		BWI76_RS00585	0.13	-0.2
117,034	-		BWI76_RS00585	0.13	-1.9
117,072	-		BWI76_RS00585	0.17	+0.6
117,077	+		BWI76_RS00585	0.17	-0.7
117,112	-		BWI76_RS00585	0.21	-0.2
117,115	-		BWI76_RS00585	0.21	-0.0
117,117	-		BWI76_RS00585	0.22	+0.1
117,215	-		BWI76_RS00585	0.32	-0.7
117,250	-		BWI76_RS00585	0.36	+0.7
117,285	+		BWI76_RS00585	0.40	-1.3
117,331	+				+0.1
117,431	+		BWI76_RS00585	0.56	-0.5
117,444	-		BWI76_RS00585	0.57	+0.1
117,451	-		BWI76_RS00585	0.58	+1.1
117,488	-		BWI76_RS00585	0.62	-0.6
117,542	+		BWI76_RS00585	0.68	+0.7
117,564	+		BWI76_RS00585	0.70	-0.9
117,577	+		BWI76_RS00585	0.71	+0.4
117,795	+				-0.9
117,801	+				+0.4
117,829	+				-0.9
117,859	+				-0.5
117,891	+				-0.8
117,899	-				+0.6
118,113	-		BWI76_RS00590	0.52	+2.0
118,290	-		BWI76_RS00590	0.88	-0.2
118,448	-				+0.4
118,450	+				+0.1
118,458	-				-2.1
118,524	+		BWI76_RS00595	0.14	-0.7
118,623	+		BWI76_RS00595	0.22	+0.9
118,631	+		BWI76_RS00595	0.22	-2.1
118,644	-		BWI76_RS00595	0.23	+1.2
118,757	-		BWI76_RS00595	0.32	-1.3
118,914	+		BWI76_RS00595	0.45	-0.0
118,951	+		BWI76_RS00595	0.47	-1.3
118,970	-		BWI76_RS00595	0.49	-0.5
118,999	-		BWI76_RS00595	0.51	+0.3
119,012	+		BWI76_RS00595	0.52	-1.0
119,120	+		BWI76_RS00595	0.61	-0.5
119,151	-		BWI76_RS00595	0.63	+1.1
119,242	-		BWI76_RS00595	0.70	-1.3
119,259	-		BWI76_RS00595	0.72	-2.6
119,274	+		BWI76_RS00595	0.73	+0.8