Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00415

Experiment: Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml
87,087	+				+1.1
87,269	-				-3.7
87,414	-		BWI76_RS00415	0.23	-2.4
87,492	+		BWI76_RS00415	0.35	-0.8
87,523	+		BWI76_RS00415	0.41	+0.1
87,543	-		BWI76_RS00415	0.44	-0.8
87,604	-		BWI76_RS00415	0.54	+0.1
87,614	+		BWI76_RS00415	0.56	-0.1
87,772	-		BWI76_RS00415	0.82	-1.4
87,796	+		BWI76_RS00415	0.86	-2.7
87,804	-		BWI76_RS00415	0.88	-1.5
87,882	-				-2.5
88,062	+		BWI76_RS00420	0.22	+1.1
88,140	+		BWI76_RS00420	0.31	+0.5
88,295	-		BWI76_RS00420	0.49	+2.6
88,316	-		BWI76_RS00420	0.52	-0.3
88,464	+		BWI76_RS00420	0.69	-1.4
88,464	-		BWI76_RS00420	0.69	+0.9
88,472	-		BWI76_RS00420	0.70	+0.2
88,484	-		BWI76_RS00420	0.71	-0.6
88,523	+		BWI76_RS00420	0.76	-2.4
88,531	-		BWI76_RS00420	0.77	-0.2
88,599	-		BWI76_RS00420	0.84	-1.1
88,648	+				-1.4
88,736	+				+1.1