Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34600

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,371,663	-		BPHYT_RS34595	0.84	+0.7
3,371,958	+				-1.6
3,371,958	+				+0.8
3,371,959	-				-0.1
3,372,205	+				+0.3
3,372,783	+		BPHYT_RS34600	0.47	-0.3
3,372,783	+		BPHYT_RS34600	0.47	+0.8
3,373,140	+		BPHYT_RS34600	0.75	+0.3
3,373,276	+		BPHYT_RS34600	0.86	-0.1
3,373,295	+		BPHYT_RS34600	0.88	-0.3
3,373,295	+		BPHYT_RS34600	0.88	+0.4
3,373,556	-				-0.8
3,373,570	+				-0.2
3,373,580	+				-0.0
3,373,580	+				+0.4
3,373,591	+				+0.7
3,373,693	+				+0.9
3,373,908	+		BPHYT_RS34605	0.13	-0.2
3,374,114	+		BPHYT_RS34605	0.41	+0.5
3,374,266	+		BPHYT_RS34605	0.62	-1.6