Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34100

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,247,401	+		BPHYT_RS34095	0.18	+0.8
3,247,440	+		BPHYT_RS34095	0.21	+0.7
3,247,501	-		BPHYT_RS34095	0.27	+0.6
3,247,570	-		BPHYT_RS34095	0.34	+0.4
3,247,762	-		BPHYT_RS34095	0.52	+4.1
3,247,762	-		BPHYT_RS34095	0.52	+0.4
3,248,321	-				+0.3
3,248,536	-		BPHYT_RS34100	0.15	+0.8
3,248,794	-		BPHYT_RS34100	0.38	+1.9
3,249,379	-				-0.9
3,249,379	-				-2.6
3,249,407	+				+0.9
3,249,423	+				+0.4
3,249,545	+				-0.3
3,249,545	+				-0.4
3,249,546	-				+1.7
3,249,547	+				+0.0
3,249,547	+				+0.2
3,249,563	+				-0.1
3,249,821	+		BPHYT_RS34105	0.14	-0.2
3,249,822	-		BPHYT_RS34105	0.14	+2.3
3,249,852	-		BPHYT_RS34105	0.16	+0.6