Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32735

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
2,922,044	-				+0.3
2,922,044	-				+0.5
2,922,103	+				-0.2
2,922,180	-				+0.4
2,922,180	-				-0.6
2,922,612	+		BPHYT_RS32730	0.70	-1.7
2,922,705	-		BPHYT_RS32730	0.85	-0.4
2,922,867	+		BPHYT_RS32735	0.13	-0.4
2,922,896	+		BPHYT_RS32735	0.19	-0.1
2,922,897	-		BPHYT_RS32735	0.20	-1.3
2,923,028	+		BPHYT_RS32735	0.49	-0.0
2,923,285	+				+0.6
2,923,285	+				-0.1
2,923,492	+		BPHYT_RS32740	0.13	+0.0
2,923,494	+		BPHYT_RS32740	0.13	-1.4
2,923,669	-		BPHYT_RS32740	0.30	-0.8
2,923,692	+		BPHYT_RS32740	0.33	+2.1
2,923,791	+		BPHYT_RS32740	0.42	+0.4
2,923,791	+		BPHYT_RS32740	0.42	-0.4
2,923,792	-		BPHYT_RS32740	0.42	+0.4
2,923,792	-		BPHYT_RS32740	0.42	+0.4
2,923,872	+		BPHYT_RS32740	0.50	+0.6
2,924,172	+		BPHYT_RS32740	0.80	-0.3
2,924,173	-		BPHYT_RS32740	0.80	-0.5
2,924,173	-		BPHYT_RS32740	0.80	+0.1