Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32360
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X |
---|---|---|---|---|---|
remove | |||||
2,830,113 | + | -0.0 | |||
2,830,992 | + | +0.5 | |||
2,831,339 | - | BPHYT_RS32360 | 0.28 | -0.1 | |
2,832,096 | + | +0.8 | |||
2,832,141 | - | +0.5 | |||
2,832,402 | - | BPHYT_RS32365 | 0.20 | +1.4 | |
2,832,503 | - | BPHYT_RS32365 | 0.29 | -0.3 | |
2,832,880 | + | BPHYT_RS32365 | 0.64 | +1.2 | |
2,832,880 | + | BPHYT_RS32365 | 0.64 | +0.5 | |
2,832,897 | - | BPHYT_RS32365 | 0.66 | +0.6 |
Or see this region's nucleotide sequence