Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31990

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
2,737,531	+				+0.8
2,737,532	-				-0.5
2,737,532	-				-1.9
2,737,540	+				+0.5
2,737,541	-				+0.1
2,737,905	-				-0.6
2,737,905	-				-1.6
2,737,914	-				-0.2
2,738,020	+				+0.2
2,738,020	+				+2.4
2,738,042	-				+3.9
2,738,047	-				+0.7
2,738,118	+				-0.7
2,738,121	+				+0.3
2,738,126	+				-0.9
2,738,126	+				-0.1
2,738,127	-				+1.2
2,738,127	-				-1.7
2,738,177	+				+0.0
2,738,178	-				-0.9
2,738,221	+				+0.1
2,738,222	-				+0.0
2,738,222	-				+0.7
2,738,443	-				-0.4