Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30680

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
2,439,782	-		BPHYT_RS30675	0.79	-0.1
2,439,782	-		BPHYT_RS30675	0.79	+0.2
2,439,789	+		BPHYT_RS30675	0.80	-2.2
2,439,789	+		BPHYT_RS30675	0.80	-0.3
2,439,790	-		BPHYT_RS30675	0.80	+1.1
2,439,790	-		BPHYT_RS30675	0.80	+0.5
2,440,108	-				-0.1
2,440,108	-				-1.5
2,440,521	-		BPHYT_RS30680	0.13	-0.3
2,440,921	+		BPHYT_RS30680	0.41	+0.0
2,440,922	-		BPHYT_RS30680	0.41	-0.9
2,441,189	+		BPHYT_RS30680	0.60	-2.1
2,441,190	-		BPHYT_RS30680	0.60	+0.8
2,441,588	+		BPHYT_RS30680	0.88	-0.1
2,441,589	-		BPHYT_RS30680	0.88	+0.6
2,441,630	+				+0.6
2,441,682	-				-0.0
2,441,791	+				-1.9
2,441,791	+				+0.8
2,441,865	-				+0.3
2,442,299	+		BPHYT_RS30685	0.50	+2.8
2,442,558	-		BPHYT_RS30685	0.75	+0.8
2,442,664	-		BPHYT_RS30685	0.86	-0.7
2,442,674	-		BPHYT_RS30685	0.87	+0.0
2,442,749	+				+0.3