Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30200

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
2,329,778	-		BPHYT_RS30195	0.82	-0.6
2,329,799	-		BPHYT_RS30195	0.83	-1.2
2,330,174	+				+0.4
2,330,174	+				+0.9
2,330,175	-				-0.0
2,330,345	+		BPHYT_RS30200	0.16	+1.0
2,330,414	+		BPHYT_RS30200	0.21	-0.2
2,331,069	-		BPHYT_RS30200	0.72	+0.3
2,331,069	-		BPHYT_RS30200	0.72	-0.3
2,331,465	+				+0.7
2,331,510	+				+0.2
2,331,514	-				-1.2
2,331,519	+				-1.2
2,331,522	+				+0.1
2,331,523	-				+0.1
2,331,663	+		BPHYT_RS30205	0.30	+1.2
2,331,663	+		BPHYT_RS30205	0.30	-0.8
2,331,722	-		BPHYT_RS30205	0.39	+0.6
2,331,798	+		BPHYT_RS30205	0.50	-1.7
2,332,111	-				+0.4
2,332,111	-				-0.4
2,332,230	+				+0.7
2,332,383	+				+0.3
2,332,383	+				-0.2
2,332,384	-				-0.3