Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16880

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,827,321	+				-0.4
3,827,321	+				-0.1
3,827,322	-				-0.9
3,827,322	-				+1.4
3,827,345	+				-0.3
3,827,346	-				+0.7
3,827,346	-				+0.1
3,827,346	-				-0.5
3,827,346	-				+0.5
3,827,348	+				+0.3
3,827,348	+				-0.6
3,827,349	-				+4.2
3,827,349	-				-0.6
3,827,564	+		BPHYT_RS16875	0.30	-0.2
3,827,581	+		BPHYT_RS16875	0.32	-0.5
3,827,582	-		BPHYT_RS16875	0.32	+0.7
3,827,681	+		BPHYT_RS16875	0.45	-0.2
3,827,682	-		BPHYT_RS16875	0.45	-0.1
3,827,682	-		BPHYT_RS16875	0.45	+1.8
3,827,682	-		BPHYT_RS16875	0.45	+0.1
3,827,682	-		BPHYT_RS16875	0.45	-0.6
3,827,708	+		BPHYT_RS16875	0.48	+0.9
3,827,879	+		BPHYT_RS16875	0.69	-0.4
3,827,879	+		BPHYT_RS16875	0.69	-1.4
3,827,880	-		BPHYT_RS16875	0.69	-1.3
3,827,882	+		BPHYT_RS16875	0.70	-2.0
3,827,883	-		BPHYT_RS16875	0.70	-0.0
3,827,997	+				+1.7
3,828,056	+				+0.1
3,828,056	+				-0.2
3,828,057	-				-0.1
3,828,057	-				-0.1
3,828,057	-				-0.3
3,828,057	-				-0.2
3,828,089	+				+0.5
3,828,090	-				+1.5
3,828,122	+				-0.1
3,828,145	-				-0.2
3,828,145	-				-0.3
3,828,145	-				+0.7
3,828,366	-				-0.4
3,828,944	+		BPHYT_RS16880	0.31	-0.8
3,828,945	-		BPHYT_RS16880	0.31	-0.6
3,829,936	-		BPHYT_RS16880	0.74	-0.0
3,830,502	+				+0.2
3,830,502	+				+0.3
3,830,532	-				+0.3
3,830,551	-				-0.0
3,830,551	-				-0.2
3,830,551	-				-1.0
3,830,551	-				+2.2
3,830,556	+				+0.7
3,830,557	-				+0.1
3,830,587	-				-0.2