Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13370

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,052,895	+		BPHYT_RS13365	0.38	+0.6
3,052,896	-		BPHYT_RS13365	0.38	+2.9
3,053,117	-		BPHYT_RS13365	0.52	-0.9
3,053,430	+		BPHYT_RS13365	0.72	+0.0
3,053,526	+		BPHYT_RS13365	0.78	-0.0
3,053,551	-		BPHYT_RS13365	0.79	+0.5
3,053,551	-		BPHYT_RS13365	0.79	+0.4
3,053,551	-		BPHYT_RS13365	0.79	+0.6
3,053,598	+		BPHYT_RS13365	0.82	-0.8
3,053,789	+				-0.8
3,053,790	-				+1.2
3,053,790	-				-1.0
3,053,878	-				-0.2
3,053,878	-				+0.7
3,053,887	+				-0.9
3,053,887	+				+0.3
3,054,116	+		BPHYT_RS13370	0.27	-0.1
3,054,471	-		BPHYT_RS13370	0.68	+0.4
3,054,471	-		BPHYT_RS13370	0.68	+1.7
3,055,378	-		BPHYT_RS13375	0.42	+0.4