Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08400

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
1,925,345	+				-0.3
1,925,580	+				+1.0
1,925,653	-				+1.4
1,925,782	+				+0.2
1,925,859	+				+1.5
1,925,859	+				-0.1
1,926,031	-				-1.7
1,926,104	-				-1.7
1,926,404	-		BPHYT_RS08400	0.46	+0.5
1,926,431	-		BPHYT_RS08400	0.51	+0.4
1,926,483	+		BPHYT_RS08400	0.60	+1.0
1,926,538	+		BPHYT_RS08400	0.70	+2.3
1,926,752	-				+0.4
1,927,046	+				+0.9
1,927,148	+				+0.9
1,927,149	-				-0.1
1,927,488	+		BPHYT_RS08405	0.82	+0.6