Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07085
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X |
|---|---|---|---|---|---|
| remove | |||||
| 1,600,728 | + | BPHYT_RS07080 | 0.39 | +0.2 | |
| 1,601,170 | - | BPHYT_RS07080 | 0.83 | +0.3 | |
| 1,601,301 | + | -1.1 | |||
| 1,601,331 | - | +0.5 | |||
| 1,601,439 | + | +0.7 | |||
| 1,601,508 | + | +0.5 | |||
| 1,601,509 | - | -0.6 | |||
| 1,602,200 | + | BPHYT_RS07085 | 0.68 | +0.1 | |
| 1,602,377 | + | +3.0 | |||
| 1,602,565 | + | +1.0 | |||
| 1,602,565 | + | +0.8 | |||
| 1,602,901 | + | BPHYT_RS07090 | 0.87 | +0.3 | |
| 1,602,913 | - | -0.3 | |||
| 1,602,978 | + | +0.8 |
Or see this region's nucleotide sequence