Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04525

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
1,044,155	+				+1.3
1,044,682	+		BPHYT_RS04525	0.52	+0.7
1,044,683	-		BPHYT_RS04525	0.52	+2.5
1,044,685	+		BPHYT_RS04525	0.52	+1.3
1,044,969	-		BPHYT_RS04525	0.88	+0.2
1,045,147	+				+0.2
1,045,452	+		BPHYT_RS04530	0.12	+0.1
1,045,452	+		BPHYT_RS04530	0.12	+0.5
1,045,452	+		BPHYT_RS04530	0.12	+1.3
1,045,452	+		BPHYT_RS04530	0.12	-0.2
1,045,453	-		BPHYT_RS04530	0.12	+0.0
1,045,575	+		BPHYT_RS04530	0.24	+0.8
1,045,575	+		BPHYT_RS04530	0.24	-1.4
1,045,575	+		BPHYT_RS04530	0.24	+0.1
1,045,576	-		BPHYT_RS04530	0.24	-0.5
1,045,576	-		BPHYT_RS04530	0.24	+0.3
1,045,576	-		BPHYT_RS04530	0.24	-0.2
1,045,605	-		BPHYT_RS04530	0.26	+1.6
1,045,605	-		BPHYT_RS04530	0.26	-1.8
1,045,693	-		BPHYT_RS04530	0.34	-0.9
1,045,770	+		BPHYT_RS04530	0.42	+0.2